In a biomimetic approach, metal Phthalocyanines (Pcs) can be considered to efficiently model single atom catalysts (SACs), hosting catalytically active single metal atoms in their macrocyclic cages. An ordered 2D array of SACs can thus be obtained when metal Pcs are assembled in a regular framework. In this work we consider in particular Iron Pcs (FePcs) on an ultra-thin alumina film grown on the Ni3Al(111) surface. Intrinsic modulations in the potential energy surface related with the oxide film structure drive the self-assembly of FePc molecules into a regular array, with molecular vacancies forming a hexagonal Bravais lattice with the same periodicity of the substrate, i.e. with a lattice parameter of about 4 nm. The symmetry of the supramolecular structure is dictated by the template rather than by the C4v symmetry of the individual molecules, thus indicating prevalence of molecule-substrate interactions with respect to intermolecular forces. The same hexagonal periodicity extends also to the multilayer, which starts forming already before completion of the first, interfacial monolayer. The latter exhibits a local definite chirality, also propagating to the multilayer in a determined stacking sequence.
The fascination with the optical properties of naturally occurring systems has been driven in part by nature's ability to produce a diverse palette of vibrant colors from a relatively small number of common structural motifs. Within this context, some cephalopod species have evolved skin cells called iridophores and leucophores whose constituent ultrastructures reflect light in different ways but are composed of the same high refractive index material─a protein called reflectin. Although such natural optical systems have attracted much research interest, measuring the refractive indices of biomaterial-based structures across multiple different environments and establishing theoretical frameworks for accurately describing the obtained refractive index values has proven challenging. Herein, we employ a synergistic combination of experimental and computational methodologies to systematically map the three-dimensional refractive index distributions of model self-assembled reflectin-based structures both in vivo and in vitro. When considered together, our findings may improve understanding of squid skin cell functionality, augment existing methods for characterizing protein-based optical materials, and expand the utility of emerging holotomographic microscopy techniques.
Uncommon metal oxidation states in porphyrinoid cofactors are responsible for the activity of many enzymes. The F430 and P450nor co-factors, with their reduced NiI - and FeIII -containing tetrapyrrolic cores, are prototypical examples of biological systems involved in methane formation and in the reduction of nitric oxide, respectively. Herein, using a comprehensive range of experimental and theoretical methods, we raise evidence that nickel tetraphenyl porphyrins deposited in vacuo on a copper surface are reactive towards nitric oxide disproportionation at room temperature. The interpretation of the measurements is far from being straightforward due to the high reactivity of the different nitrogen oxides species (eventually present in the residual gas background) and of the possible reaction intermediates. The picture is detailed in order to disentangle the challenging complexity of the system, where even a small fraction of contamination can change the scenario.
Wrinkled surfaces and materials are found throughout the natural world in various plants and animals and are known to improve the performance of emerging optical and electrical technologies. Despite much progress, the reversible post-fabrication tuning of wrinkle sizes and geometries across multiple length scales has remained relatively challenging for some materials, and the development of comprehensive structure-function relationships for optically active wrinkled surfaces has often proven difficult. Herein, by drawing inspiration from natural cephalopod skin and leveraging methodologies established for artificial adaptive infrared platforms, we engineer systems with hierarchically reconfigurable wrinkled surface morphologies and dynamically tunable visible-to-infrared spectroscopic properties. Specifically, we demonstrate architectures for which mechanical actuation changes the surface morphological characteristics; modulates the reflectance, transmittance, and absorptance across a broad spectral window; controls the specular-to-diffuse reflectance ratios; and alters the visible and thermal appearances. Moreover, we demonstrate the incorporation of these architectures into analogous electrically actuated appearance-changing devices that feature competitive figures of merit, such as reasonable maximum areal strains, rapid response times, and good stabilities upon repeated actuation. Overall, our findings constitute another step forward in the continued development of cephalopod-inspired light- and heat-manipulating systems and may facilitate advanced applications in the areas of sensing, electronics, optics, soft robotics, and thermal management.
Atomically-defined graphene nanoribbons (GNRs), which are narrow strips of graphene that feature a quantum confinement-induced bandgap, have shown great promise for applications in the next generation of semiconductor devices. Although numerous studies have demonstrated the bottom-up synthesis of all-carbon GNRs, a comparatively limited number of reports have focused on the preparation of nitrogen-doped GNRs, with two general types of architectures demonstrated to date. Herein, we describe the design, synthesis, and characterization of a new class of nitrogen-containing GNRs consisting of repeating tetrabenzopentacene molecular subunits. Our findings may afford additional possibilities and opportunities with regard to the directed bottom-up synthesis of heteroatom-doped, carbon-based nanoscale electronics.
In the last decade, hydrogen (H-)tautomerization, that is, a reaction that involves simple intramolecular proton transfer, has been studied in single phthalocyanine, porphyrin, and porphycene derivatives as a prototypical single molecular conductance switch. Here, by means of low-temperature scanning tunneling microscopy and density functional theory calculations, we report a binary H-tautomerism and stereoisomeric conformational switch in (amino-functionalized) porphyrins assembled in molecular chains on a gold surface. We show that the formation of the chain is crucial for the binary tautomeric switch mechanism as the single molecule switches differently. Our findings suggest that the (amino-)functionalization of molecules can be exploited not only to drive the formation of molecular self-assemblies but also to steer their switching properties.
The thermal treatment of a monolayer of 1-naphthylmethylamine (NMA) on Ni(1 1 1) surface reveals a complex chemistry promoted by the high surface reactivity. Both the amino-terminated functional group and the naphthalene body of NMA undergo a progressive dehydrogenation, which eventually leads to the coalescence of the molecules. As a result, 2D structures of increasing size are synthesized on the surface, characterized by a graphene-like lattice in which nitrogen atoms are mainly incorporated as pyridinic substitutional defects. In this paper, we show the evidence of the formation of extended nitrogen-doped graphene (N-GR) domains at temperatures as low as 300 degrees C, with band dispersion measurements that reveal p-type doping.
Naturally occurring and recombinant protein-based materials are frequently employed for the study of fundamental biological processes and are often leveraged for applications in areas as diverse as electronics, optics, bioengineering, medicine, and even fashion. Within this context, unique structural proteins known as reflectins have recently attracted substantial attention due to their key roles in the fascinating color-changing capabilities of cephalopods and their technological potential as biophotonic and bioelectronic materials. However, progress toward understanding reflectins has been hindered by their atypical aromatic and charged residue-enriched sequences, extreme sensitivities to subtle changes in environmental conditions, and well-known propensities for aggregation. Herein, we elucidate the structure of a reflectin variant at the molecular level, demonstrate a straightforward mechanical agitation-based methodology for controlling this variant's hierarchical assembly, and establish a direct correlation between the protein's structural characteristics and intrinsic optical properties. Altogether, our findings address multiple challenges associated with the development of reflectins as materials, furnish molecular-level insight into the mechanistic underpinnings of cephalopod skin cells' color-changing functionalities, and may inform new research directions across biochemistry, cellular biology, bioengineering, and optics.
Peculiar hydrogen-bonded molecular chains are spontaneously created from the self-assembly on a gold surface of a porphyrin functionalized with four aromatic amine moieties. The molecular chains are formed by a sequence of dyads, where the same molecule behaves alternately as a hydrogen-bond acceptor or donor as a whole at all its four aromatic amino groups. This remarkable bifunctional behavior is due to the conformational flexibility of the functionalizing amino groups that switch from a planar, aniline-like conformation in donors to a pyramidal, amine-like one in acceptors. Furthermore, we show that the acceptor porphyrins can trap gold adatoms underneath their center. Combined scanning tunneling microscopy experiments and density functional theory calculations characterize the structural and electronic modifications suffered by such molecules to establish amino-amino interactions. Notably, scanning tunneling spectroscopy measurements show that the highest occupied molecular orbital-lowest unoccupied molecular orbital gaps of the acceptors and donors are, respectively, larger and smaller with respect to the isolated molecule according to the reduced extent of conjugation occurring in the acceptors. In summary, experimental and theoretical results reveal a remarkable hydrogen-bonded complex where the amino groups act as both hydrogen-bond donors and acceptors and suggest how hydrogen bonding can modify the geometrical and potentially also the electronic structures of highly conjugated molecules.
Crown ethers, assembled into a regular 2D array via a chemical guesthost recognition process, have been successfully employed to trap sodium atoms on a surface, under ultra- high vacuum conditions.
Effective thermal management is critical for the operation of many modern technologies, such as electronic circuits, smart clothing, and building environment control systems. By leveraging the static infrared-reflecting design of the space blanket and drawing inspiration from the dynamic color-changing ability of squid skin, we have developed a composite material with tunable thermoregulatory properties. Our material demonstrates an on/off switching ratio of ~25 for the transmittance, regulates a heat flux of ~36 W/m2 with an estimated mechanical power input of ~3 W/m2, and features a dynamic environmental setpoint temperature window of ~8 °C. Moreover, the composite can manage one fourth of the metabolic heat flux expected for a sedentary individual and can also modulate localized changes in a wearer's body temperature by nearly 10-fold. Due to such functionality and associated figures of merit, our material may substantially reduce building energy consumption upon widespread deployment and adoption.
We show that, for the formation of a metallorganic monolayer, it is possible to artificially divert from substrate- to laterally-driven self-assembly mechanisms by properly tailoring the corrugation of the potential energy surface of the growth template. By exploiting the capability of an ultrathin alumina film to host metallic nanoparticle seeds, we tune the symmetry of a iron phthalocyanine (FePc) two-dimensional crystal, thus showing that it is possible to switch from trans to lateral dominating interactions in the controlled growth of an organic/inorganic heterostack. Finally, by selecting the size of the metallic clusters, we can also control the FePc-metal interaction strength.
A regular 2D array of crown molecules, which would spontaneously self-assemble into disordered molecular clusters, is obtained by exploiting a guest-host process, based on the chemical affinity between amino and carboxylic groups on a gold surface. First a carboxylic organic template is formed, which then serves as a host for amino-functionalized crown molecules. The amino-carboxylic interaction thereby drives the formation of a monolayer of guest molecules, regularly distributed at the nanometer scale, preventing their aggregation in unordered clusters observed on a bare gold surface. This method, which can be applied to other guest molecules, represents a novel route to overcome the shape-matching requirements of the standard guest-host architectures. Furthermore, it is intrinsically selective, due to the chemical nature of the anchoring process.
Long-lived excitons formed upon visible light absorption play an essential role in photo-voltaics, photocatalysis, and even in high-density information storage. Here, we describe a self-assembled two-dimensional metal-organic crystal, composed of graphene-supported macrocycles, each hosting a single FeN4 center, where a single carbon monoxide molecule can adsorb. In this heme-like biomimetic model system, excitons are generated by visible laser light upon a spin transition associated with the layer 2D crystallinity, and are simultaneously detected via the carbon monoxide ligand stretching mode at room temperature and near-ambient pressure. The proposed mechanism is supported by the results of infrared and time-resolved pump-probe spectroscopies, and by ab initio theoretical methods, opening a path towards the handling of exciton dynamics on 2D biomimetic crystals.
The original version of this Article contained an error in the spelling of the author Claus Michael Schneider, which was incorrectly given as Claus Michael Schneidery. This has now been corrected in both the PDF and HTML versions of the Article.
We performed a combined experimental and theoretical study of the assembly of phenylboronic acid on the Au(111) surface, which is found to lead to the formation of triphenylboroxines by spontaneous condensation of trimers of molecules. The interface between the boroxine group and the gold surface has been characterized in terms of its electronic properties, revealing the existence of an ultra-fast charge delocalization channel in the proximity of the oxygen atoms of the heterocyclic group. More specifically, the DFT calculations show the presence of an unoccupied electronic state localized on both the oxygen atoms of the adsorbed triphenylboroxine and the gold atoms of the topmost layer. By means of resonant Auger electron spectroscopy, we demonstrate that this interface state represents an ultra-fast charge delocalization channel. Boroxine groups are among the most widely adopted building blocks in the synthesis of covalent organic frameworks on surfaces. Our findings indicate that such systems, typically employed as templates for the growth of organic films, can also act as active interlayers that provide an efficient electronic transport channel bridging the inorganic substrate and organic overlayer.
The adsorption of CO on Pt nanoclusters grown in a regular array on a template provided by the graphene/Ir(111) Moiré was investigated by means of infrared-visible sum frequency generation vibronic spectroscopy, scanning tunneling microscopy, X-ray photoelectron spectroscopy from ultrahigh vacuum to near-ambient pressure, and ab initio simulations. Both terminally and bridge bonded CO species populate nonequivalent sites of the clusters, spanning from first to second-layer terraces to borders and edges, depending on the particle size and morphology and on the adsorption conditions. By combining experimental information and the results of the simulations, we observe a significant restructuring of the clusters. Additionally, above room temperature and at 0.1 mbar, Pt clusters catalyze the spillover of CO to the underlying graphene/Ir(111) interface.