Distinguishing a model's lack of knowledge (epistemic uncertainty) from inherent task randomness (aleatoric uncertainty) is crucial for reliable AI. However, standard evaluation metrics of confidence scores target different aspects. AUC and accuracy capture predictive signal, proper scoring rules capture overall uncertainty, and calibration metrics isolate part of the epistemic uncertainty but ignore heterogeneity of the errors within bins, known as grouping loss. We close this evaluation gap by introducing asymptotically consistent and sample-efficient lower-bound estimators for the grouping loss and excess risk, i.e. suboptimality of a prediction. Our estimators complement existing calibration metrics to provide a more complete, fine-grained assessment of epistemic uncertainty. Applied to LLM question-answering with inherent aleatoric noise, our estimator reveals substantial grouping loss which decreases with model scale but is amplified by instruction tuning. The local nature of our estimators provides actionable insights: they automatically identify subgroups with systematic over- or under-confidence for interpretable audits. We also demonstrate that it reveals better the need of post-training. Finally, we leverage our estimator to design efficient LLM cascades that defer to stronger models, achieving higher accuracy at a lower cost than competing approaches.
Survival analysis deals with modeling the time until an event occurs, and accurate probability estimates are crucial for decision-making, particularly in the competing-risks setting where multiple events are possible. While recent work has addressed calibration in standard survival analysis, the competing-risks setting remains under-explored as it is harder (the calibration applies to both probabilities across classes and time horizon). We show that existing calibration measures are not suited to the competing-risk setting and that recent models do not give well-behaved probabilities. To address this, we introduce a dedicated framework with two novel calibration measures that are minimized for oracle estimators (i.e., both measures are proper). We also introduce some methods to estimate, test, and correct the calibration. Our recalibration methods yield good probabilities while preserving discrimination.
Benchmarking tabular learning has revealed the benefit of dedicated architectures, pushing the state of the art. But real-world tables often contain string entries, beyond numbers, and these settings have been understudied due to a lack of a solid benchmarking suite. They lead to new research questions: Are dedicated learners needed, with end-to-end modeling of strings and numbers? Or does it suffice to encode strings as numbers, as with a categorical encoding? And if so, do the resulting tables resemble numerical tabular data, calling for the same learners? To enable these studies, we contribute STRABLE, a benchmarking corpus of 108 tables, all real-world learning problems with strings and numbers across diverse application fields. We run the first large-scale empirical study of tabular learning with strings, evaluating 445 pipelines. These pipelines span end-to-end architectures and modular pipelines, where strings are first encoded, then post-processed, and finally passed to a tabular learner. We find that, because most tables in the wild are categorical-dominant, advanced tabular learners paired with simple string embeddings achieve good predictions at low computational cost. On free-text-dominant tables, large LLM encoders become competitive. Their performance also appears sensitive to post-processing, with differences across LLM families. Finally, we show that STRABLE is a good set of tables to study "string tabular" learning as it leads to generalizable pipeline rankings that are close to the oracle rankings. We thus establish STRABLE as a foundation for research on tabular learning with strings, an important yet understudied area.
Foundation models for predictive machine learning on tabular data have recently gained significant traction in academia and industry. Research communities across disciplines are increasingly evaluating tabular foundation models on diverse datasets and tasks. However, these task- and discipline-specific evaluations remain largely inaccessible to model researchers because benchmark software and evaluation protocols are fragmented. As a result, model researchers rely on standard benchmarks, which are mostly defined for tasks where tabular foundation models already excel. The most challenging scenarios are excluded, limiting meaningful progress in the field by focusing on marginal improvements on IID data rather than on broader, more demanding challenges. To overcome this, we introduce BeyondArena, the first unified holistic benchmark for tabular data that supports diverse task types (IID, temporal, grouped), across sample size and feature dimensionality scales, with diverse feature types (with text, with high cardinality) from a broad range of disciplines. To enable unified benchmarking beyond standard benchmarks, we introduce Data Foundry, a Python framework and metadata schema for curating tabular datasets for predictive machine learning. Our results across 11 models and 142 curated datasets show that existing tabular foundation models excel on tiny- to medium-sized IID data, while traditional tree-based and deep learning models still dominate on non-IID, large, and high-dimensional datasets. BeyondArena guides model research for the most demanding challenges in tabular data, enabling progress towards truly foundational tabular models.
Performance uncertainty quantification is essential for reliable validation and eventual clinical translation of medical imaging artificial intelligence (AI). Confidence intervals (CIs) play a central role in this process by indicating how precise a reported performance estimate is. Yet, due to the limited amount of work examining CI behavior in medical imaging, the community remains largely unaware of how many diverse CI methods exist and how they behave in specific settings. The purpose of this study is to close this gap. To this end, we conducted a large-scale empirical analysis across a total of 24 segmentation and classification tasks, using 19 trained models per task group, a broad spectrum of commonly used performance metrics, multiple aggregation strategies, and several widely adopted CI methods. Reliability (coverage) and precision (width) of each CI method were estimated across all settings to characterize their dependence on study characteristics. Our analysis revealed five principal findings: 1) the sample size required for reliable CIs varies from a few dozens to several thousands of cases depending on study parameters; 2) CI behavior is strongly affected by the choice of performance metric; 3) aggregation strategy substantially influences the reliability of CIs, e.g. they require more observations for macro than for micro; 4) the machine learning problem (segmentation versus classification) modulates these effects; 5) different CI methods are not equally reliable and precise depending on the use case. These results form key components for the development of future guidelines on reporting performance uncertainty in medical imaging AI.
Diabetes duration is a major determinant of complications and an essential variable for clinical research, yet the diagnosis date is frequently unavailable in structured electronic health records (EHRs). Although large language models (LLMs) have shown promise for clinical information extraction, their added value over established rule-based approaches for this task remains unclear. This study aimed to compare the performance and computational efficiency of prompting-based LLMs and a rule-based extraction method for identifying diabetes diagnosis dates from French clinical notes. Clinical notes of patients with diabetes (600 type 1 and 100 type 2) were extracted from the Assistance Publique-Hôpitaux de Paris Clinical Data Warehouse and manually annotated. Notes of type 1 diabetes were divided into training (n=200), validation (n=200) and test (n=200) sets; notes of type 2 were only used as test set. We compared a rule-based ContextualMatcher with five open-weight LLMs (Qwen3-8B, LLaMA-3.1-8B-Instruct, Ministral-8B-Reasoning, Ministral-14B-Reasoning, and MedGemma-27B) using zero-shot and few-shot prompting, with reasoning enabled when supported. Predictions within ±1 year of the reference annotation were considered correct. Performance was evaluated using F1-score, precision, recall, balanced accuracy, specificity, hallucination rate, no-prediction rate, mean absolute error (MAE), and inference time. On the type 1 diabetes test set, MedGemma-27B achieved the highest F1-score (0.94, 95% CI 0.91–0.96), followed by Qwen3-8B with reasoning (0.93, 95% CI 0.90–0.96), compared with 0.86 (95% CI 0.82–0.90) for the best ContextualMatcher. LLMs showed the greatest advantage for relative diagnosis dates (best F1 1.00 vs 0.82). Performance generalized to type 2 diabetes despite model development being conducted exclusively on type 1 notes, with MedGemma-27B achieving an F1-score of 0.96 and the best ContextualMatcher 0.89. Few-shot prompting did not consistently improve performance, and dedicated reasoning models performed inconsistently. The rule-based approach processed notes in 0.01–0.02 seconds using CPUs only, whereas LLM inference required 0.2–2.0 seconds per note and two NVIDIA A100 GPUs. Qwen3-8B with reasoning required approximately 50-fold longer inference time than the best ContextualMatcher. Prompting-based LLMs achieved the highest accuracy for diabetes diagnosis date extraction from French clinical notes but provided only modest performance gains over a well-tuned rule-based approach while requiring substantially greater computational resources. For large-scale EHR research, rule-based methods remain an efficient and competitive option, whereas LLMs may be most valuable when maximizing extraction accuracy for linguistically heterogeneous expressions justifies the additional computational cost.
Tabular foundation models, such as TabPFNv2 and TabICL, have recently dethroned gradient-boosted trees at the top of predictive benchmarks, demonstrating the value of in-context learning for tabular data. We introduce TabICooL, a new state-of-the-art foundation model for regression and classification built on three pillars: (1) a novel synthetic data generation engine designed for high pretraining diversity; (2) various architectural innovations, including a new scalable softmax in attention improving generalization to larger datasets without prohibitive long-sequence pretraining; and (3) optimized pretraining protocols, notably replacing AdamW with the Muon optimizer. On the TabArena and TALENT benchmarks, TabICooL without any tuning matches or surpasses the performance of the current state-of-the-art, RealTabPFN-2.5 (hyperparameter-tuned, ensembled, and fine-tuned on real data). With only moderate pretraining compute, TabICooL generalizes effectively to million-scale datasets under 50GB GPU memory while being markedly faster than RealTabPFN-2.5. We provide extensive ablation studies to quantify these contributions and commit to open research by releasing our weights, synthetic data engine, and pretraining code (upon publication).
It is important for Large Language Models (LLMs) to be aware of the boundary of their knowledge, i.e., the mechanism of identifying known and unknown queries. This type of awareness enables models to perform adaptive inference, such as invoking retrieval-augmented generation (RAG), engaging in slow and deep thinking, or abstaining from answering when appropriate. These mechanisms are beneficial to the development of efficient and trustworthy AI. In this work, we propose a method to detect knowledge boundaries via \textbf{\emph{Query-Level Uncertainty }}, which estimates if a model is capable of to answering a given query before generating any tokens. To this end, we propose a novel, training-free method called \textbf{\emph{Internal Confidence}}, which leverages self-evaluations across layers and tokens to provide a reliable signal of uncertainty. Empirical studies on both factual question answering and mathematical reasoning tasks demonstrate that our internal confidence can outperform several baselines. Furthermore, we showcase that our proposed method can be used for adaptive inference, such as efficient RAG and model cascading, thereby reducing inference costs while preserving overall performance.
Tabular Foundation Models have recently established the state of the art in supervised tabular learning, by leveraging pretraining to learn generalizable representations of numerical and categorical structured data. However, they lack native support for unstructured modalities such as text and image, and rely on frozen, pretrained embeddings to process them. On established Multimodal Tabular Learning benchmarks, we show that tuning the embeddings to the task improves performance. Existing benchmarks, however, often focus on the mere co-occurrence of modalities; this leads to high variance across datasets and masks the benefits of task-specific tuning. To address this gap, we introduce MulTaBench, a benchmark of 40 datasets, split equally between image-tabular and text-tabular tasks. We focus on predictive tasks where the modalities provide complementary predictive signal, and where generic embeddings lose critical information, necessitating Target-Aware Representations that are aligned with the task. Our experimental results demonstrate that the gains from target-aware representation tuning generalize across both text and image modalities, several tabular learners, encoder scales, and embedding dimensions. MulTaBench constitutes the largest image-tabular benchmarking effort to date, spanning high-impact domains such as healthcare and e-commerce. It is designed to enable the research of novel architectures which incorporate joint modeling and target-aware representations, paving the way for the development of novel Multimodal Tabular Foundation Models.
Modern machine learning progresses through empirical work, benchmarking new methods to evaluate relative performance. However, the statistical variability inherent to evaluation - exacerbated by the stochastic nature of many algorithms - often makes performance estimation unreliable due to the limited test samples available, leading to a validation crisis in which genuine advances are difficult to discern. In this work, we show that cross-validation improves markedly confidence when evaluating and comparing learning algorithm performances. We introduce the concept of sample gain, which quantifies the virtual data augmentation achieved by using multiple cross-validation splits to reduce benchmarking variance. Experiments on both synthetic and real-world datasets (histopathologic scans and NLP fine-tuning) demonstrate that multiple splits can substantially improve the reliability and stability of performance estimates, with diminishing returns often setting in later than expected. We also introduce a procedure to dynamically early-stop cross-validation by estimating from the first few folds if subsequent folds will bring large sample gains. Our findings highlight the value of pushing cross-validation on available samples to achieve robust and reliable benchmarking.
Probabilistic models are typically trained using task-agnostic objectives like log-loss, which can lead to significant errors in downstream estimation. This disconnect is especially critical in Inverse Probability Weighting (IPW) for causal inference, where propensity score errors near 0 and 1 often lead to high bias and variance. We propose a principled framework for deriving task-specific strictly proper scoring rules by matching the local curvature of the downstream error metric. We apply this to the Average Treatment Effect (ATE) estimation, deriving a closed-form loss and its corresponding canonical probability mapping that can be readily integrated with any model like a neural network or a gradient boosting algorithm. Extensive evaluations on causal inference benchmarks demonstrate that our tailored objective consistently outperforms standard likelihood-based and covariate-balancing approaches.
BACKGROUND:We investigate which procedure selects the most trustworthy predictive model to explain the effect of an intervention and support decision-making. METHODS:We study a large variety of model selection procedures in practical settings: finite samples settings and without a theoretical assumption of well-specified models. Beyond standard cross-validation or internal validation procedures, we also study elaborate causal risks. These build proxies of the causal error using "nuisance" reweighting to compute it on the observed data. We evaluate whether empirically estimated nuisances, which are necessarily noisy, add noise to model selection and compare different metrics for causal model selection in an extensive empirical study based on a simulation and 3 health care datasets based on real covariates. RESULTS:Among all metrics, the mean squared error, classically used to evaluate predictive modes, is worse. Reweighting it with a propensity score does not bring much improvement in most cases. On average, the $R\text{-risk}$, which uses as nuisances a model of mean outcome and propensity scores, leads to the best performances. Nuisance corrections are best estimated with flexible estimators such as a super learner. CONCLUSIONS:When predictive models are used to explain the effect of an intervention, they must be evaluated with different procedures than standard predictive settings, using the $R\text{-risk}$ from causal inference.
With the growing attention and investment in recent AI approaches such as large language models, the narrative that the larger the AI system the more valuable, powerful and interesting it is is increasingly seen as common sense. But what is this assumption based on, and how are we measuring value, power, and performance? And what are the collateral consequences of this race to ever-increasing scale? Here, we scrutinize the current scaling trends and trade-offs across multiple axes and refute two common assumptions underlying the 'bigger-is-better' AI paradigm: 1) that performance improvements are driven by increased scale, and 2) that all interesting problems addressed by AI require large-scale models. Rather, we argue that this approach is not only fragile scientifically, but comes with undesirable consequences. First, it is not sustainable, as, despite efficiency improvements, its compute demands increase faster than model performance, leading to unreasonable economic requirements and a disproportionate environmental footprint. Second, it implies focusing on certain problems at the expense of others, leaving aside important applications, e.g. health, education, or the climate. Finally, it exacerbates a concentration of power, which centralizes decision-making in the hands of a few actors while threatening to disempower others in the context of shaping both AI research and its applications throughout society.
The long-standing dominance of gradient-boosted decision trees on tabular data is currently challenged by tabular foundation models using In-Context Learning (ICL): setting the training data as context for the test data and predicting in a single forward pass without parameter updates. While TabPFNv2 foundation model excels on tables with up to 10K samples, its alternating column- and row-wise attentions make handling large training sets computationally prohibitive. So, can ICL be effectively scaled and deliver a benefit for larger tables? We introduce TabICL, a tabular foundation model for classification, pretrained on synthetic datasets with up to 60K samples and capable of handling 500K samples on affordable resources. This is enabled by a novel two-stage architecture: a column-then-row attention mechanism to build fixed-dimensional embeddings of rows, followed by a transformer for efficient ICL. Across 200 classification datasets from the TALENT benchmark, TabICL is on par with TabPFNv2 while being systematically faster (up to 10 times), and significantly outperforms all other approaches. On 53 datasets with over 10K samples, TabICL surpasses both TabPFNv2 and CatBoost, demonstrating the potential of ICL for large data. Pretraining code, inference code, and pre-trained models are available at https://github.com/soda-inria/tabicl.
Large Language Models (LLMs) may one day replace search engines as the primary portal to information on the Web. In this opinion paper, we investigate the societal challenges that such a change could bring. We focus on the roles of LLM Providers, Content Creators, and End Users, and identify 15 types of challenges. With each, we show current mitigation strategies – both from the technical perspective and the legal perspective. We also discuss the impact of each challenge and point out future research opportunities.
Probabilistic classifiers are central for making informed decisions under uncertainty. Based on the maximum expected utility principle, optimal decision rules can be derived using the posterior class probabilities and misclassification costs. Yet, in practice only learned approximations of the oracle posterior probabilities are available. In this work, we quantify the excess risk (a.k.a. regret) incurred using approximate posterior probabilities in batch binary decision-making. We provide analytical expressions for miscalibration-induced regret (R-GL), as well as tight and informative upper and lower bounds on the regret of calibrated classifiers (R-GL).These expressions allow us to identify regimes where recalibration alone addresses most of the regret, and regimes where the regret is dominated by the grouping loss, which calls for post-training beyond recalibration. Crucially, both R-GL and R-GL can be estimated in practice using a calibration curve and a recent grouping loss estimator. On NLP experiments, we show that these quantities identify when the expected gain of more advanced post-training is worth the operational cost. Finally, we highlight the potential of multicalibration approaches as efficient alternatives to costlier fine-tuning approaches.
Medical segmentation models are evaluated empirically. As such an evaluation is based on a limited set of example images, it is unavoidably noisy. Beyond a mean performance measure, reporting confidence intervals is thus crucial. However, this is rarely done in medical image segmentation. The width of the confidence interval depends on the test set size and on the spread of the performance measure (its standard-deviation across the test set). For classification, many test images are needed to avoid wide confidence intervals. Segmentation, however, has not been studied, and it differs by the amount of information brought by a given test image. In this paper, we study the typical confidence intervals in the context of segmentation in 3D brain magnetic resonance imaging (MRI). We carry experiments on using the standard nnU-net framework, two datasets from the Medical Decathlon challenge that concern brain MRI (hippocampus and brain tumor segmentation) and two performance measures: the Dice Similarity Coefficient and the Hausdorff distance. We show that the parametric confidence intervals are reasonable approximations of the bootstrap estimates for varying test set sizes and spread of the performance metric. Importantly, we show that the test size needed to achieve a given precision is often much lower than for classification tasks. Typically, a 1% wide confidence interval requires about 100-200 test samples when the spread is low (standard-deviation around 3%). More difficult segmentation tasks may lead to higher spreads and require over 1000 samples. The corresponding code and notebooks are available on GitHub at https://github.com/rosanajurdi/SegVal_Repo.
Performance comparisons are fundamental in medical imaging Artificial Intelligence (AI) research, often driving claims of superiority based on relative improvements in common performance metrics. However, such claims frequently rely solely on empirical mean performance. In this paper, we investigate whether newly proposed methods genuinely outperform the state of the art by analyzing a representative cohort of medical imaging papers. We quantify the probability of false claims based on a Bayesian approach that leverages reported results alongside empirically estimated model congruence to estimate whether the relative ranking of methods is likely to have occurred by chance. According to our results, the majority (>80
Background and objective(s) In this study, we explore the competing risks framework in survival analysis, where the goal is not only to predict the time until an event occurs but also to account for the possibility of multiple outcomes. Traditional survival analysis models focus on a single event, but competing risks present a classification challenge, which has been less explored. A key limitation of classic competing risks models lies in the coupling of architecture and loss, affecting scalability. As an example, the well-known Fine&Gray linear model has a computational cost that grows quadratically, making it impossible to use for analyzing large observational cohorts, which are increasingly common today. Material and Methods We have designed a strictly censoring-adjusted separable scoring rule to address these issues. This loss incorporates the Inverse Propensity Censoring Weighting (IPCW) scheme, a well-established method to adjust for the censoring distribution. Thus, this scoring rule allows optimization on a subset of the data because the evaluation of the loss is conducted independently for each observation during training. Our new loss estimates outcome probabilities and enables stochastic optimization for competing risks. Although our loss function can be used with any stochastic optimization algorithm, we opted for a novel gradient-boosting method specifically designed for survival analysis and competing risks settings: SuvivalBoost. Using gradient-boosted trees, this method naturally handles missing values, making it well-suited for real-world datasets. Results We first establish the theoretical properties of our strictly proper scoring rule in the context of competing risks. Then, we demonstrate the abilities of SurvivalBoost. Indeed, SurvivalBoost outperforms 12 state-of-the-art models across several metrics on 4 real-life datasets, both in competing risks and survival settings. Among those models, we compared SurvivalBoost with marginal models depending on the setting -Aalen-Johansen or Kaplan-Meier-, with linear models -Cox or Fine&Gray-, machine learning methods using trees -Random Forests or Gradient Boosting methods- and deep-learning methods e.g. DeepHit. Regarding the different datasets, we considered SEER, one large real-life competing risks dataset with 500k datapoints with 60% of censored events, and three survival analysis datasets of varying sizes (METABRIC with 1k datapoints, SUPPORT with 8k datapoints, and KKBOX with 2M datapoints). We found that SurvivalBoost obtains the best results on several metrics, but also provides excellent calibration, the ability to predict across any time horizon, and faster computation times compared to existing methods, and prove that most of them do not scale to datasets like SEER or KKBOX even with GPUs. Conclusion This work is detailed in an article available on Arxiv (https://arxiv.org/pdf/2410.16765) and we provide an open-source with the Python library hazardous (https://soda-inria.github.io/hazardous/), which is compatible with Scikit-learn. The library also includes several competing risks metrics - the adapted C-index and the Integrated Brier Score in the competing risks setting, and the accuracy in time, a metric to assess the most predicted event and the observed event for a given patient - and practical examples for applying SurvivalBoost in both survival and competing risks scenarios.