Blooms of Aureococcus anophagefferens in Chincoteague Bay were observed during 5 of 6 years between 2002 and 2007. In order to understand factors controlling blooms, interannual differences in nitrogen and carbon uptake and concentrations of dissolved constituents were compared at two sites in Chincoteague Bay, MD and VA over the 6-year time period. Over that time, we observed that there was no single nitrogen compound that fueled blooms each year. Instead, A . anophagefferens took up a wide range of nitrogen compounds to meet its nutritional demands. Although photosynthetic carbon fixation was the dominant form of carbon acquisition during blooms, organic carbon uptake contributed up to 30 % of the total carbon uptake. In addition to interannual variability in nitrogen and carbon uptake, we observed that there was an increase in bloom intensity and duration over the 6-year study period during which dissolved organic carbon appeared to accumulate in the system.

Total maximum daily loads for nitrogen (N) are currently being established for the Chesapeake Bay watershed. While we know inorganic N is bioavailable in the environment and therefore its input contributes to cultural eutrophication, the bioavailability of organic N is unclear. Using bioassay experiments, we examined the impact of effluent-derived organic nitrogen (EON) from wastewater treatment plants on natural water samples collected along an estuarine/salinity gradient within the lower Chesapeake Bay watershed. All of the inorganic N and between 31% and 96% of the EON was removed during biotic bioassays within the first 2 days. Further, there was substantial abiotic reactivity of effluent N when it was added to natural water samples. Results demonstrate that organic and inorganic N in effluent is removed to support the growth of microbial communities. These are the first results aimed at assessing the reactivity of EON in natural waters along an estuarine/salinity gradient.

Leucine and thymidine incorporation were examined in size-fractionated estuarine communities and in cultures of phytoplankton known to use dissolved organic nitrogen (DON). Cultured phytoplankton species were used to establish that phytoplankton took up leucine and thymidine into protein and DNA, respectively. Subsequently, incorporation of leucine and thymidine was measured in size-fractionated populations collected from the Lafayette River, VA, a eutrophic estuary where resident populations contain bloom-forming phytoplankton known to take up DON, and the Gulf of Mexico during a bloom of the mixotrophic red tide dinoflagellate, Karenia brevis. We examined the efficacy of size fractionation for determining phytoplankton versus bacterial incorporation of leucine and thymidine under conditions employed during bacterial productivity bioassays, and antibiotics were used to distinguish between bacterial and phytoplankton incorporation in cultured and natural populations. Results suggest that cultures and natural assemblages of phytoplankton can take up both leucine and thymidine when supplied at low concentrations (10 and 12 nmol L−1, respectively) and during short incubations (15 min to 1 h). In natural populations, up to 95% of the leucine and thymidine incorporation during short bioassays was recovered in the >5.0-μm size fraction that contained ≤4.2% of the bacterial biomass.

To determine the roles of dissolved organic matter in the onset, duration, and decline of blooms of the “brown tide” pelagophyte, Aureococcus anophagefferens, nutrient and microbial dynamics, heterotrophic and autotrophic carbon (C) and nitrogen (N) uptake, and peptide hydrolysis were compared in natural populations: (1) seasonally, among physically similar sites in a mid-Atlantic coastal lagoon, Chincoteague Bay, (2) at an individual site as a bloom initiated, developed, and declined, and (3) in whole versus size-fractionated water. Throughout the year, urea was the dominant form of N taken up at both bloom and nonbloom sites. C acquisition in the A. anophagefferens (1.2–5.0 μm) size fraction was dominated by bicarbonate uptake during bloom initiation but organic C compounds were taken up later during and after the bloom. Bacterial productivity was enhanced during and just after the bloom and bacterial abundance was four times higher at the bloom versus nonbloom site.

During August and September 2007, the lower Chesapeake Bay and its tributaries experienced a massive bloom of Cochlodinium polykrikoides Margalef (>104 cells per milliliter) that persisted for over a month, was extremely patchy, and at times penetrated into the Atlantic Ocean. The onset of the bloom coincided with a period of intense rainfall and stormwater runoff after a protracted summer drought period. Genetic evidence showed this species to be distinct from many Asian strains but similar to other North American strains. Populations dominated by C. polykrikoides took up a variety of nitrogenous compounds to support their growth and were able to mobilize additional sources of organic nutrients through peptide hydrolysis. Bioassays determined that C. polykrikoides exerted a lethal affect on juvenile fish and shellfish, causing 100% mortality of juvenile fish (Cyprinodon variegates) in less than 24 h and 20% mortality in juvenile American oysters (~21 mm; Crassostrea virginica) within 72 h.

Blooms of the brown tide pelagophyte, Aureococcus anophagefferens, have been reported in coastal bays along the east coast of the USA for nearly two decades. Blooms appear to be constrained to shallow bays that have low flushing rates, little riverine input and high salinities (e.g., >28). Nutrient enrichment and coastal eutrophication has been most frequently implicated as the cause of A. anophagefferens and other blooms in coastal bays. We compare N and C dynamics during two brown tide blooms, one in Quantuck Bay, on Long Island, NY in 2000, and the other in Chincoteague Bay, at Public Landing, MD in 2002, with a physically similar site in Chincoteague Bay that did not experience a bloom. We found that the primary forms of nitrogen (N) taken up during the bloom in Quantuck Bay were ammonium and dissolved free amino acids (DFAA) while the primary form of N fueling production at both sites in Chincoteague Bay was urea. At both Chincoteague sites, amino acid carbon (C) was taken up while urea C was not. Even though A. anophagefferens has the ability to take up organic C, during the bloom at Chincoteague Bay, photosynthetic uptake of bicarbonate was the dominant pathway of C acquisition by the >1.2μm size fraction during the day. C uptake by cells <5.0μm was insufficient to meet cellular C demand based on the measured N uptake rates and the C:N ratio of particulate material. While cells >1.2μm did not take up much organic C during the day, smaller cells (>0.2μm) did. Peptide hydrolysis appeared to play an important role in mobilizing organic matter in Quantuck Bay, where amino acids contributed substantially to N and C uptake, but not in Chincoteague Bay. Dissolved organic N (DON), dissolved organic C (DOC) concentrations and the DOC/DON ratio were higher and total dissolved inorganic N (DIN) concentrations were lower at the bloom site in Chincoteague Bay than at the nonbloom site in the same bay. We conclude that A. anophagefferens is capable of using a wide variety of N and C compounds, and that nutrient inputs, biotic interactions and the dominant recycling pathways determine which compounds are available and which metabolic pathways are active at a particular site.