Septic system malfunctions can cause untreated sewage to pond in yards or contaminate drinking water wells leading to environmental and health problems. While most malfunction detections rely on reports by individuals, machine learning and remote sensing can be used to identify potentially failing systems. We propose a methodology that combines a machine learning technique implemented in Maxent with unmanned aerial system (UAS) mapping to create a priority queue for inspection and detecting malfunctions apparent in the collected imagery. We demonstrate the approach in Wake County, North Carolina, a County with 73,347 septic systems located within drinking water supply watersheds. The predictive modeling identified 102 systems with a 99.9% probability of failure. Four properties from the queue were mapped by UAS and the acquired imagery was visually analyzed in the visible spectrum for signs of malfunction. Our results suggest that the proposed approach can assist in the early identification of failing systems minimizing the environmental impacts and saving resource time and funds.

Bivalves are extremely sensitive to environmental conditions. The movement of their shells and the gap in-between the valves can serve as indicators of water pollutants entering surface water bodies. This letter proposes a novel sensing system to accurately calculate the valve-gaping angle in bivalves. The sensor unit is comprised of two inertial measurement units for each bivalve to estimate the angle between the two valves. Monitoring of multiple bivalves is possible with several water-insulated sensor units tethered with flexible cables to a central base station housing the processing unit. Miniaturization of the sensor packaging and flexibility of the wires ensured minimum hindrance to the animals’ natural behavior. The precision and accuracy of the angle measurement were tested with a benchtop servo motor setup simulating the gaping behavior. The standard deviation of measurements at a steady state was 0.78$^\circ$, and the average change in measurement during a 10$^\circ$ step was 9.98$^\circ$. Over 250 h of in vivo validation experiments demonstrated the consistency of the angle measurements using the presented method alongside a magnetic alternative, which had an average correlation coefficient of $-$0.89. The sensor system provides an accurate study of bivalve gaping behavior and facilitates the potential use of bivalves as environmental sentinels due to their valve-gaping being a biomarker for monitoring water pollution.

Nucleic acid-based molecular detection of mitochondrial DNA (mtDNA) has been used for the detection of eukaryotic pathogens, genetic markers, and biomedical studies in humans and animals, forensic investigation, conservation biology, and environmental monitoring. Currently available molecular mtDNA testing is predominately dependent on relatively expensive laboratory equipment, which limits test applicability for on-site field testing. Recent technical advances in molecular testing of mtDNA using microfluidic chip technology and paper-based methods, and assays based on isothermal nucleic acid amplification show promise for field assay development. Microfluidic and paper-based components for mtDNA sample preparation and isothermal amplification establish the groundwork for targeted detection. The goal is on-site field detection mtDNA assays that combine sample processing, assay setup, and visual representation of the presence of mtDNA. This review examines advantages and disadvantages of alternative field-compatible tests for on-site detection of mtDNA. Despite challenges, developing an integrated "sample-through detection" field test platform is the future direction for mtDNA molecular detection in environmental samples.

Leptospirosis is a zoonotic disease with symptoms in humans and animals, ranging from subclinical to serious and fatal. The disease occurs worldwide, but there is limited recognition of the public and animal health risks it poses in the southern United States. A systematic review of the frequency of animal leptospirosis in 17 states and jurisdictions covering the southern continental United States was performed to advance our understanding of the pathogen's distribution and identify transmission patterns that could be targeted for prevention efforts. Fifty-two articles, spanning >100 years, met the analysis criteria. A wide range of techniques were used to measure seroprevalence and isolate the bacteria. The assessment identified exposure to Leptospira spp and Leptospira spp infection among a diverse range of species, spanning 22 animal families within 14 states, suggesting that the pathogen is distributed throughout the southern region. Disease frequency trends were assessed among animals in various habitats (all habitats, nonwild habitats, and wild habitats). The frequency of Leptospira spp detection in animals in wild habitats increased slightly over time (<0.2%/year). We identified reports of 11 human leptospirosis illness clusters and outbreaks in the southern United States. Exposure to potentially contaminated surface waters were documented for at least seven of the events, and interactions with infected or likely infected animals were documented for at least six of the events. This analysis highlights the need for stronger partnerships across the public and animal health fields to enhance diagnostics, surveillance, and reporting. The early identification of leptospirosis in animals may serve as an indicator of environmental contamination and trigger prevention measures, such as vaccinating companion animals and livestock, use of potable water, and the wearing of waterproof protective clothing near water that may be contaminated.

Leptospirosis is a zoonotic disease with symptoms in humans and animals, ranging from subclinical to serious and fatal. The disease occurs worldwide, but there is limited recognition of the public and animal health risks it poses in the southern United States. A systematic review of the frequency of animal leptospirosis in 17 states and jurisdictions covering the southern continental United States was performed to advance our understanding of the pathogen's distribution and identify transmission patterns that could be targeted for prevention efforts. Fifty-two articles, spanning >100 years, met the analysis criteria. A wide range of techniques were used to measure seroprevalence and isolate the bacteria. The assessment identified exposure to Leptospira spp and Leptospira spp infection among a diverse range of species, spanning 22 animal families within 14 states, suggesting that the pathogen is distributed throughout the southern region. Disease frequency trends were assessed among animals in various habitats (all habitats, nonwild habitats, and wild habitats). The frequency of Leptospira spp detection in animals in wild habitats increased slightly over time (<0.2%/year). We identified reports of 11 human leptospirosis illness clusters and outbreaks in the southern United States. Exposure to potentially contaminated surface waters were documented for at least seven of the events, and interactions with infected or likely infected animals were documented for at least six of the events. This analysis highlights the need for stronger partnerships across the public and animal health fields to enhance diagnostics, surveillance, and reporting. The early identification of leptospirosis in animals may serve as an indicator of environmental contamination and trigger prevention measures, such as vaccinating companion animals and livestock, use of potable water, and the wearing of waterproof protective clothing near water that may be contaminated.

BACKGROUND:The common bed bug, Cimex lectularius, is an obligatory blood-feeding ectoparasite that requires a blood meal to molt and produce eggs. Their frequent biting to obtain blood meals and intimate association with humans increase the potential for disease transmission. However, despite more than 100 years of inquiry into bed bugs as potential disease vectors, they still have not been conclusively linked to any pathogen or disease. This ecological niche is extraordinarily rare, given that nearly every other blood-feeding arthropod is associated with some type of human or zoonotic disease. Bed bugs rely on the bacteria Wolbachia as an obligate endosymbiont to biosynthesize B vitamins, since they acquire a nutritionally deficient diet, but it is unknown if Wolbachia confers additional benefits to its bed bug host. In some insects, Wolbachia induces resistance to viruses such as Dengue, Chikungunya, West Nile, Drosophila C and Zika, and primes the insect immune system in other blood-feeding insects. Wolbachia might have evolved a similar role in its mutualistic association with the bed bug. In this study, we evaluated the influence of Wolbachia on virus replication within C. lectularius. METHODS:We used feline calicivirus as a model pathogen. We fed 40 bed bugs from an established line of Wolbachia-cured and a line of Wolbachia-positive C. lectularius a virus-laden blood meal, and quantified the amount of virus over five time intervals post-feeding. The antibiotic rifampicin was used to cure bed bugs of Wolbachia. RESULTS:There was a significant effect of time post-feeding, as the amount of virus declined by ~90% over 10 days in both groups, but no significant difference in virus titer was observed between the Wolbachia-positive and Wolbachia-cured groups. CONCLUSIONS:These findings suggest that other mechanisms are involved in virus suppression within bed bugs, independent of the influence of Wolbachia, and our conclusions underscore the need for future research.

Unionid mussels are ecologically important and are globally imperiled. Toxicants contribute to mussel declines, and toxicity tests using juvenile mussels-a sensitive life stage-are valuable in determining thresholds used to set water quality criteria. In vitro culture methods provide an efficient way to propagate juveniles for toxicity testing, but their relative chemical sensitivity compared with in vivo propagated juveniles is unknown. Current testing guidelines caution against using in vitro cultured juveniles until this sensitivity is described. Our objective was to evaluate the relative sensitivity of juvenile mussels produced from both in vitro and in vivo propagation methods to selected chemicals. We conducted 96-h acute toxicity tests according to ASTM International guidelines with 3 mussel species and 6 toxicants: chloride, nickel, ammonia, and 3 copper-based compounds. Statistically significant differences between in vitro and in vivo juvenile 96-h median effect concentrations were observed in 8 of 17 tests, and in vitro juveniles were more sensitive in 6 of the 8 significant differences. At 96 h, 4 of the 8 statistically different tests for a given chemical were within a factor of 2, which is the intralaboratory variation demonstrated in a recent evaluation of mussel toxicity tests. We found that although differences in chemical sensitivity exist between in vitro and in vivo propagated juvenile mussels, they are within normal toxicity test variation. Therefore, in vitro propagated juvenile mussels may be appropriate for use in ASTM International-based toxicity testing. Environ Toxicol Chem 2018;37:3077-3085. (c) 2018 SETAC

Abstract: Much is still unknown about why freshwater mussels (Unionidae) are particularly sensitive to environmental change. A better understanding of freshwater mussel metabolism is needed, and the field of environmental metabolomics holds the promise to inform these questions. A number of protocols exist for the extraction of metabolites for identification from animal tissues. As a first step in the application of environmental metabolomics to the study of freshwater mussels, we compared extraction protocols using an inorganic oxidizing acid (perchloric acid), an organic nitrile (acetonitrile), and a salt/water solution (Ringer's solution) to establish an uncomplicated, robust, repeatable and inexpensive tissue extraction protocol for freshwater mussel tissue. Perchloric acid resulted in notable extraction of energy-related nucleotides (AMP/ADP/ATP), yet had the lowest peak count of the three extraction methods and showed poor repeatability. Acetonitrile and Ringer's solution yielded metabolite extraction results similar to each other with Ringer's solution having the greatest number of peaks particularly in the 3.0–4.5 ppm sugar/amino acid range. Ringer's solution is simple to use, safe and consistent and bears consideration when selecting an extraction protocol for 1H nuclear magnetic resonance experiments.

The spirochaete (Borrelia burgdorferi) associated with Lyme disease was detected in questing ticks and rodents during a period of 18years, 1991-2009, at five locations on the Outer Banks of North Carolina. The black-legged tick (Ixodes scapularis) was collected at varied intervals between 1991 and 2009 and examined for B.burgdorferi. The white-footed mouse (Peromyscus leucopus), house mouse (Mus musculus) marsh rice rat (Oryzomys palustris), marsh rabbit (Sylvilagus palustris), eastern cottontail (Sylvilagus floridanus) and six-lined racerunner (Cnemidophorus sexlineatus) were live-trapped, and their tissues cultured to isolate spirochaetes. Borrelia burgdorferi isolates were obtained from questing adult I.scapularis and engorged I.scapularis removed from P.leucopus, O.palustris and S.floridanus. The prevalence of B.burgdorferi infection was variable at different times and sites ranging from 7 to 14% of examined questing I.scapularis. Mitochondrial (16S) rRNA gene phylogenetic analysis from 65 adult I.scapularis identified 12 haplotypes in two major clades. Nine haplotypes were associated with northern/Midwestern I.scapularis populations and three with southern I.scapularis populations. Sixteen isolates obtained from tick hosts in 2005 were confirmed to be B.burgdorferi by amplifying and sequencing of 16S rRNA and 5S-23S intergenic spacer fragments. The sequences had 98-99% identity to B.burgdorferi sensu stricto strains B31, JD1 and M11p. Taken together, these studies indicate that B.burgdorferi sensu stricto is endemic in questing I.scapularis and mammalian tick hosts on the Outer Banks of North Carolina.

Freshwater mussel distributions are heavily reliant upon the range and movement of host fishes and are subject to range restrictions when fish migration is blocked. The Columbia Dam on the Broad River in Columbia, SC, has been a barrier to the migration of anadromous species and other fish in the river since 1824. As a result, 5 freshwater mussel species are restricted to reaches of the river downstream of the dam. In 2006, a fish passage was created to facilitate fish movement between stream reaches above and below the dam. Fish hosts that use the passage could facilitate the recolonization of reaches above the dam by freshwater mussels. We conducted laboratory trials to determine the fish hosts of 4 of the species limited to reaches below the dam. The most suitable hosts for Lampsilis cariosa (Yellow Lampmussel) were Morone chrysops (White Bass), Morone saxatilis (Striped Bass), and Pomoxis nigromaculatus (Black Crappie), whereas Micropterus salmoides (Largemouth Bass) and Micropterus dolomieu (Smallmouth Bass) transformed fewer juvenile mussels. Lampsilis siliquoidea (Fatmucket) hosts were Largemouth Bass and Perca flavescens (Yellow Perch). Yellow Perch, Largemouth Bass, Lepomis macrochirus (Bluegill), and Lepomis gibossus (Pumpkinseed) were the best hosts for Ligumia nasuta (Eastern Pondmussel). We suspected that Elliptio roanokensis (Roanoke Slabshell) used anadromous fishes as hosts because its distribution is limited to mainstem rivers below the downstream-most dam. We confirmed that 2 Clupeidae, Dorosoma cepedianum (Gizzard Shad) and Alosa aestivalis (Blueback Herring), and 1 Moronidae, Morone americana (White Perch), are hosts for Roanoke Slabshell. Many of the host-fish species identified in this study are highly mobile, and we expect the range of these mussels to eventually expand upstream of the Columbia Dam as fish make use of the new passage.

We used (1)H nuclear magnetic resonance spectroscopy to describe key metabolites of the polar metabolome of the freshwater mussel, Elliptio complanata. Principal components analysis documented variability across tissue types and river of origin in mussels collected from two rivers in North Carolina (USA). Muscle, digestive gland, mantle and gill tissues yielded identifiable but overlapping metabolic profiles. Variation in digestive gland metabolic profiles between the two mussel collection sites was characterized by differences in mono- and disaccharides. Variation in mantle tissue metabolomes appeared to be associated with sex. Nuclear magnetic resonance spectroscopy is a sensitive means to detect metabolites in the tissues of E. complanata and holds promise as a tool for the investigation of freshwater mussel health and physiology.

"Compendium of Veterinary Standard Precautions for Zoonotic Disease Prevention in Veterinary Personnel: National Association of State Public Health Veterinarians: Veterinary Infection Control Committee 2015" published on 01 Dec 2015 by American Veterinary Medical Association.

We used H-1 nuclear magnetic resonance spectroscopy to describe key metabolites of the polar metabolome of the freshwater mussel, Elliptio complanata. Principal components analysis documented variability across tissue types and river of origin in mussels collected from two rivers in North Carolina (USA). Muscle, digestive gland, mantle and gill tissues yielded identifiable but overlapping metabolic profiles. Variation in digestive gland metabolic profiles between the two mussel collection sites was characterized by differences in mono- and disaccharides. Variation in mantle tissue metabolomes appeared to be associated with sex. Nuclear magnetic resonance spectroscopy is a sensitive means to detect metabolites in the tissues of E. complanata and holds promise as a tool for the investigation of freshwater mussel health and physiology.

This study examined seasonal differences in microbial community structure in the sediment of three streams in North Carolina’s Neuse River Basin. Microbes that reside in sediment are at the base of the food chain and have a profound influence on the health of freshwater stream environments. Terminal-Restriction Fragment Length Polymorphism (T-RFLP), molecular fingerprint analysis of 16S rRNA genes was used to examine the diversity of bacterial species in stream sediment. Sediment was sampled in both wet and dry seasons from an agricultural (Bear), mixed urban (Crabtree) and forested (Marks) Creek, and the microbiota examined. Gamma, Alpha and Beta proteobacteria were prevalent species of microbial taxa represented among all sites. Actinobacteria was the next most prevalent species observed, with greater occurrence in dry compared to the wet season. Discernable clustering was observed of Marks and Bear Creek samples collected during the wetter period (September–April), which corresponded with a period of higher precipitation and cooler surface water temperatures. Although not statistically significant, microbial community structure appeared different between season (ANOSIM, R = 0.60; p < 0.10). Principal components analysis confirmed this pattern and showed that the bacterial groups were separated by wet and dry seasonal periods. These results suggest seasonal differences among the microbial community structure in sediment of freshwater streams and that these communities may respond to changes in precipitation during wetter periods.

Plasma textiles are novel fabrics incorporating the advantages of cold plasma and low-cost non-woven or woven textile fabrics. In plasma textiles, electrodes are integrated into the fabric, and a corona discharge is activated within and on the surface of the fabric by applying high voltages above 10 kV between the electrodes. When the plasma textile is activated, submicrometre particles approaching the textile are charged by the deposition of ions and electrons produced by the corona, and then collected by the textile material. A stable plasma discharge was experimentally verified on the surface of the textile that was locally smooth but not rigid. A filtration efficiency close to 100% was observed in experiments conducted on salt particles with diameters ranging from 50 to 300 nm. Unlike conventional fibrous filters, the plasma textile provided uniform filtration in this range, without exhibiting a maximum particle penetration size.

We delineated a permanent 15 m by 9 m reach of a mussel bed in a small piedmont stream in the Cape Fear River Basin of North Carolina, USA. A total of 14 surveys were conducted at the study site from May 2005 to September 2006 at time intervals ranging from 2 weeks to 3 months. The study area was divided into fifteen 1-m-wide transects, and each transect was thoroughly searched twice during each survey event for any mussels on the substrate surface. We recorded species identification, length, gravidity (for known females) and replaced the mussel in the exact spot it was found. A pilot study was conducted to determine detection success with one, two, and three passes per transect and detection success was monitored on all transects throughout the study. We estimate that two passes over these transects yielded approximately 90% of the mussels on the sediment surface. Vertical migration patterns of Villosa constricta, and in particular females, were highly seasonal. Additional within-season variation could not be explained by seasonal patterns alone. Larger individuals were recaptured more frequently. Female mussels became gravid from August through March indicating that spawning and glochidial release took place over an extended period. In 2005, glochidial release was 1-2 months later than in 2006 and lasted through June. In 2006, glochidial release began before 7 February in 2006 and lasted through April. Smaller V. constricta (23-28 mm) were more likely to be gravid, and about half of the individual females were observed to spawn in consecutive years.

Bacteria are ingested by suspension feeding bivalves and can be an important component of their diet. This study evaluated whether a common bacterium of vertebrate enteric origin, Escherichia coli (Migula, 1895), is retained in the stomach or gill by two different freshwater bivalve species, Corbicula fluminea (Muller, 1974) and Elliptio complanata (Lightfoot, 1786). A series of diet treatment experiments were conducted comparing each anatomical section using a delta C-13 label and E. coli cells grown from stock cultures. A significant difference in delta C-13 values was related to anatomic structure among all treatment groups during a 7-day feeding experiment (24 jars, df = 140; F = 4.88; P < 0.001). A key finding was that in gill tissue, a significant difference was observed among delta C-13-labeled and unlabeled treatment combinations for both C. fluminea and E. complanata (F = 13.57; df = 31; P < 0.0001). The results suggest that water column E. coli are likely retained on gill tissue and to a lesser degree in the stomach in both E. complanata and C. fluminea. This study serves to validate the hypothesis that E. coli may be initially more abundant in gill tissue during sorting processes before being transferred to the stomach.

Reasons for performing study: There are few objective data on return to use and performance in horses following colic surgery. Objective: To investigate return to functional use of horses following colic surgery and factors associated with a negative outcome. Methods: The North Carolina State University Equine Colic Database was reviewed for horses that underwent exploratory celiotomy for colic (20032010). Horses were excluded from the study if they survived <6 months, had no intended use preoperatively, or if further data were not available at attempted follow-up. Information retrieved included history, background, use, and selected pre-, intra-, and post operative factors. Telephone interviews were used to obtain follow-up data. Logistic regression was used to investigate associations between clinical data and outcome, reported as odds ratios with a 95% confidence interval and corresponding P value. Results: Of patients surviving to 6 months, 133/195 (68%) were performing their intended use and 85/156 (54%) were at or above preoperative performance. At one year, 145/190 (76%) horses were performing their intended use and 101/153 (66%) were at or above preoperative performance. Animals were significantly less likely to return to use/performance if they had a previous celiotomy, stall rest for an orthopaedic condition, a nonstrangulating lesion type, incisional hernia, diarrhoea or laminitis. Conclusions: The overall prognosis for return to use and performance following colic surgery is fair to good. Multiple pre- and post operative factors may affect the likelihood of return to use and performance. Potential relevance: Targeted owner education regarding preoperative lameness, post operative rehabilitation and treatment for complications, such as incisional hernioplasty, may help inform owners about their horse's potential for return to use and performance following colic surgery.