At least 40 Australian mammal spcies have been driven to extinction since European colonization in 1788. For conservation management to be effective, it is vital that the reasons for historical extinctions and ongoing declines are understood and remedied. A recent article (Wallach and Lundgren 2025) concluded that there was no compelling evidence that two introduced predators (domestic cats and red foxes) were primary causes of these mammal losses. We refute that article, finding substantial flaws in its premises, analyses, data, interpretations, and conclusions. Using multiple lines of evidence, we show that these two predators are strongly implicated in most Australian mammal extinctions and in the ongoing imperilment of numerous extant species. The devastating impact of cats and foxes on Australia's mammals has been widely recognized by conservation managers who have, in response, implemented national programs to control these predators, producing widely recognized benefits for one of the world's most remarkable native mammal faunas.
The increased severity and frequency of bushfires accompanying human-induced global warming have dire implications for biodiversity conservation. Here we investigate the response of a cryptic, cool-climate elapid, the mustardbellied snake Drysdalia rhodogaster, to the extensive Black Summer fires of 2019/2020 in south-eastern Australia. The species is categorized as Least Concern on the IUCN Red List (last assessed in 2017), but because a large part of its range was burnt during the Black Summer and little was known about its ecology, D. rhodogaster was identified as a priority species for post-fire impact assessment. We evaluated three lines of evidence to assess the impact of the Black Summer fires on D. rhodogaster. Habitat suitability modelling indicated that c. 46% of the predicted range of the species was affected by bushfire. Field surveys conducted -9-36 months post-fire and collation of records from public databases submitted 0-24 months post-fire indicated that D. rhodogaster persisted in burnt landscapes. Fire severity and proportion of the landscape that was burnt within a 1,000m radius of survey sites were poor predictors of site occupancy byD. rhodogaster. Although conclusions regarding the effects of fire on D. rhodogaster are limited because of the lack of baseline data, it is evident that the species has persisted across the landscape in the wake of extensive bushfires. Our work highlights the need for baseline knowledge on cryptic species even when they are categorized as Least Concern, as otherwise assessments of the impacts of catastrophic events will be constrained
To address uncertainties surrounding the impacts of unprecedented 2019-20 bushfires in south-eastern Australia, we convened a symposium on field-measured impacts on biodiversity for the 2020 Ecological Society of Australia conference. Nine presentations covered a range of studies on plant species and communities, and reptiles and mammals. Here, we summarize the presentations and review other field studies from NSW, some of which are currently unpublished. The impacts were extensive, but results also estimated survival rate perhaps higher than first reported in the media. More than half of individual mammal, reptile and threatened rainforest trees may have survived the fire, though small populations remain very vulnerable to second fire in the near future. Comprehensive understanding of the impacts of these fires requires much more field study, and for the results to be interpreted in the context of the broader fire regime. The symposium was an important early step in that understanding.
Context and challenges center dot Australia harbours a disproportionate share of global squamate diversity (lizards and snakes). The areas impacted by the 2019-20 wildfires comprise diverse squamate communities that include many threatened and narrowly distributed species. center dot The impact of fire on most Australian squamates is not well understood. Reptile populations are monitored less than any other vertebrate group, and many species have unresolved taxonomy. Main findings center dot Very few studies have considered the effects of fire on squamate mortality or how attributes of fire regimes affect squamates in areas impacted by the 2019-20 wildfires. center dot The habitat of 445 squamate species from 11 families was within the footprint of the 2019-20 wildfires, representing nearly 40% of Australia's described species. This included 29 species listed as threatened nationally or globally. center dot One species, Kate's leaf-tailed gecko (Saltuarius kateae), had its entire known (highly restricted) range burnt, but post-fire sampling indicated that the species persists and is breeding in the firegrounds. center dot Species in most need of monitoring and conservation following the 2019-20 wildfires are narrowly distributed species with moderate-to-high fire overlap and traits that make them vulnerable to fire and post-fire conditions. center dot Assessments of within-species diversity across 14 priority species identified 19 evolutionarily significant units and more than 18 management units. center dot Assessment of the on- ground effects of the 2019-20 wildfires is hampered by a lack of long-term monitoring and investment. There is an urgent need to break a cycle of chronic under-funding of reptile monitoring and conservation in Australia, particularly given the increasing prevalence of large, high severity wildfires.
Declining wild populations combined with accumulating captive populations of e.g. livestock, pets, draught and zoo animals have resulted in some threatened species with substantial proportions of their populations in captivity. The interactions animals have with humans in captivity depend on handler familiarity and relationship quality and can affect animal health, growth and reproduction with consequences for the success of conservation programmes. However, assessments of how specific human-animal relationships affect a range of physiological and behavioural outcomes are rare. Here, we studied semi-captive Asian elephants with detailed records of elephant-handler (mahout) relationships and veterinary management, allowing assessment of multiple welfare indicators in relation to specific mahout-elephant relationship lengths and mahout experience. These included measures of physiological stress (faecal glucocorticoid metabolite [FGM], heterophil:lymphocyte ratio [H:L]), muscle damage (creatine kinase [CK]), immunological health (total white blood cell count [TWBC]) and behaviour (response to mahout verbal commands). We found no evidence that FGM or H:L related to aspects of the mahout-elephant relationship. Longer overall mahout experience (i.e. years of being a mahout) was linked to increased muscle damage and inflammation, but the lengths of specific mahout-elephant relationships were inversely associated with muscle damage in working-age elephants. Elephants responded more to familiar mahouts in behavioural tasks and faster to mahouts they had known for longer. In summary, our results found little evidence that the mahout-elephant relationship affects physiological stress in this population based on FGM and H:L, but mahout experience and relationships were linked to other physiological responses (CK, TWBC), and elephants require behavioural adjustment periods following mahout changes.
Tooling is associated with complex cognitive abilities, occurring most regularly in large-brained mammals and birds. Among birds, self-care tooling is seemingly rare in the wild, despite several anecdotal reports of this behaviour in captive parrots. Here, we show that Bruce, a disabled parrot lacking his top mandible, deliberately uses pebbles to preen himself. Evidence for this behaviour comes from five lines of evidence: (i) in over 90% of instances where Bruce picked up a pebble, he then used it to preen; (ii) in 95% of instances where Bruce dropped a pebble, he retrieved this pebble, or replaced it, in order to resume preening; (iii) Bruce selected pebbles of a specific size for preening rather than randomly sampling available pebbles in his environment; (iv) no other kea in his environment used pebbles for preening; and (v) when other individuals did interact with stones, they used stones of different sizes to those Bruce preened with. Our study provides novel and empirical evidence for deliberate self-care tooling in a bird species where tooling is not a species-specific behaviour. It also supports claims that tooling can be innovated based on ecological necessity by species with sufficiently domain-general cognition.
Recognising stress is an important component in maintaining the welfare of captive animal populations, and behavioural observation provides a rapid and non-invasive method to do this. Despite substantial testing in zoo elephants, there has been relatively little interest in the application of behavioural assessments to the much larger working populations of Asian elephants across Southeast Asia, which are managed by workers possessing a broad range of behavioural knowledge. Here, we developed a new ethogram of potential stress- and work-related behaviour for a semi-captive population of Asian elephants. We then used this to collect observations from video footage of over 100 elephants and evaluated the reliability of behavioural welfare assessments carried out by non-specialist observers. From observations carried out by different raters with no prior experience of elephant research or management, we tested the reliability of observations between-observers, to assess the general inter-observer agreement, and within-observers, to assess the consistency in behaviour identification. The majority of ethogram behaviours were highly reliable both between- and within-observers, suggesting that overall, behaviour was highly objective and could represent easily recognisable markers for behavioural assessments. Finally, we analysed the repeatability of individual elephant behaviour across behavioural contexts, demonstrating the importance of incorporating a personality element in welfare assessments. Our findings highlight the potential of non-expert observers to contribute to the reliable monitoring of Asian elephant welfare across large captive working populations, which may help to both improve elephant wellbeing and safeguard human workers.
Targeted gene flow is a novel conservation strategy that involves translocating individuals with favourable genes to areas where they will have a conservation benefit. One oft-cited risk of the strategy is the potential for outbreeding depression. Here, we used the northern quoll (Dasyurus hallucatus) as a model to test this possibility for the first time in a field setting. Northern quolls are endangered by the spread of the invasive cane toad (Rhinella marina), which they are fatally poisoned by, if they mistakenly attempt to consume them. There are, however, a small number of quolls that are “toad-smart”—they possess a heritable trait that means they innately do not attack toads. It is this trait we hoped to promote through targeted gene flow. We established a hybrid population (54 toad-smart and toad-naïve northern quolls) and introduced this population onto a small offshore, toad-infested island in 2017. Genetic data suggests an increase in the toad-smart proportion of the genome increasing from 29.4% in the release population to 40.2% in the first island generation (F2). Our data demonstrate successful in situ hybridisation between populations, with viable F2 hybrids and backcrosses observed, and some evidence of heterosis (hybrid vigour) in F1 hybrids. The population experienced significant reductions in size over the two years, however, through a combination of toad-mortality, as well as stochastic processes including fire, a cyclone, predation and ineffective breeding, and so small sample sizes hamper our results. Such establishment problems would not occur were we to attempt targeted gene flow into already established quoll populations, and our observation of successful hybridisation suggests targeted gene flow could be a viable strategy in established quoll populations soon to be impacted by toads.
Animals use irruptive movement to avoid exposure to stochastic and pervasive environmental stressors that impact fitness. Beneficial irruptive movements transfer individuals from high-stress areas (conferring low fitness) to alternative localities that may improve survival or reproduction. However, being stochastic, environmental stressors can limit an animal's preparatory capacity to enhance irruptive movement performance. Thus individuals must rely on pre-existing, or rapidly induced, physiological and behavioural responses. Rapid elevation of glucocorticoid hormones in response to environmental stressors are widely implicated in adjusting physiological and behaviour processes that could influence irruptive movement capacity. However, there remains little direct evidence demonstrating that corticosterone-regulated movement performance or interaction with pervasiveness of environmental stress, confers adaptive movement outcomes. Here, we compared how movement-related survival of cane toads (Rhinella marina) varied with three different experimental corticosterone phenotypes across four increments of increasing environmental stressor pervasiveness (i.e. distance from water in a semi-arid landscape). Our results indicated that toads with phenotypically increased corticosterone levels attained higher movement-related survival compared with individuals with control or lowered corticosterone phenotypes. However, the effects of corticosterone phenotypes on movement-related survival to some extent co-varied with stressor pervasiveness. Thus, our study demonstrates how the interplay between an individual's corticosterone phenotype and movement capacity alongside the arising costs of movement and the pervasiveness of the environmental stressor can affect survival outcomes.
The Australian northern quoll is an important predatory marsupial carnivore that is currently endangered due to inappropriate fire regimes, predation, and the spread of invasive cane toads. The microbiota of Australian marsupials has not been extensively studied, but is thought to play a role in their health. This study provides an initial characterization of the cloacal microbiota of the northern quoll, as well as other marsupials including possums and kangaroos which were opportunistically sampled. The northern quoll cloaca microbiota was dominated by Enterococcus and Lactobacillus and had a relatively high proportion of members of the Proteobacteria phylum, which has been observed in other carnivorous marsupials. The diversity and structure of the microbiota was not influenced by presence of Chlamydiales which are intracellular bacteria and potential pathogens. The microbiota of the other marsupials was quite varied, which may be related to their health status. Characterization of the northern quoll microbiota will help to better understand the biology of this endangered animal.
Our best hope of developing innovative methods to combat invasive species is likely to come from the study of high-profile invaders that have attracted intensive research not only into control, but also basic biology. Here we illustrate that point by reviewing current thinking about novel ways to control one of the world’s most well-studied invasions: that of the cane toad in Australia. Recently developed methods for population suppression include more effective traps based on the toad’s acoustic and pheromonal biology. New tools for containing spread include surveillance technologies (e.g., eDNA sampling and automated call detectors), as well as landscape-level barriers that exploit the toad’s vulnerability to desiccation—a strategy that could be significantly enhanced through the introduction of sedentary, range-core genotypes ahead of the invasion front. New methods to reduce the ecological impacts of toads include conditioned taste aversion in free-ranging predators, gene banking, and targeted gene flow. Lastly, recent advances in gene editing and gene drive technology hold the promise of modifying toad phenotypes in ways that may facilitate control or buffer impact. Synergies between these approaches hold great promise for novel and more effective means to combat the toad invasion and its consequent impacts on biodiversity.
Continued range expansion into physiologically challenging environments requires invasive species to maintain adaptive phenotypic performance. The adrenocortical stress response, governed in part by glucocorticoid hormones, influences physiological and behavioural responses of vertebrates to environmental stressors. However, any adaptive role of this response in invasive populations that are expanding into extreme environments is currently unclear. We experimentally manipulated the adrenocortical stress response of invasive cane toads (Rhinella marina) to investigate its effect on phenotypic performance and fitness at the species’ range front in the Tanami Desert, Australia. Here, toads are vulnerable to overheating and dehydration during the annual hot–dry season and display elevated plasma corticosterone levels indicative of severe environmental stress. By comparing unmanipulated control toads with toads whose adrenocortical stress response was manipulated to increase acute physiological stress responsiveness, we found that control toads had significantly reduced daily evaporative water loss and higher survival relative to the experimental animals. The adrenocortical stress response hence appears essential in facilitating complex phenotypic performance and setting fitness trajectories of individuals from invasive species during range expansion.
The ecological impact of an invasive species can be heterogeneous through space and time. One such case in A ustralia involves native freshwater crocodiles C rocodylus johnstoni , which are highly sensitive to invasive cane toads R hinella marina in some areas, whereas other populations experience little or no mortality from ingestion of the toxic toads. We studied the impact of toad invasion on three crocodile populations: one crashed, one showed a minor decrease and one appeared unaffected. We tested three hypotheses for the cause of this spatial variation in impact: differences among populations in toad–crocodile encounter rates (proximity of toads to crocodiles during spotlight surveys), differences in crocodile feeding responses (trials of prey preference in the laboratory) and differences in crocodile physiology (reduction of swim speed after receiving a dose of toad toxin). We found little divergence among populations in any of these traits: crocodiles from the three populations all encountered cane toads in the wild, and exhibited similar feeding responses and toxin tolerances. Thus, we cannot confidently identify causation for the impact heterogeneity. Reliance on alternative food resources and an ability to rapidly learn taste aversion may have allowed crocodiles to deal with toad arrival in L ake A rgyle and the D aly R iver. Future work could usefully evaluate potential explanations for the failure of these adaptive mechanisms in the severely affected ( V ictoria R iver) population. We suggest that spatial variation in the availability of alternative prey (and thus the willingness of crocodiles to attack a novel toxic prey item) may have contributed to that variation in impact.
Background: To conserve critically endangered predators, we also need to conserve the prey species upon which they depend. Velvet geckos (Oedura lesueurii) are a primary prey for the endangered broad-headed snake (Hoplocephalus bungaroides), which is restricted to sandstone habitats in southeastern Australia. We sequenced the ND2 gene from 179 velvet geckos, to clarify the lizards' phylogeographic history and landscape genetics. We also analysed 260 records from a longterm (3-year) capture-mark-recapture program at three sites, to evaluate dispersal rates of geckos as a function of locality, sex and body size.Results: The genetic analyses revealed three ancient lineages in the north, south and centre of the species' current range. Estimates of gene flow suggest low dispersal rates, constrained by the availability of contiguous rocky habitat. Mark-recapture records confirm that these lizards are highly sedentary, with most animals moving < 30 m from their original capture site even over multi-year periods.Conclusion: The low vagility of these lizards suggests that they will be slow to colonise vacant habitat patches; and hence, efforts to restore degraded habitats for broad-headed snakes may need to include translocation of lizards.
All ecosystems require constituent species to survive against a backcloth of biotic and abiotic scenery. How this scenery shapes the life-history strategies of the players and how they in turn shape the scenery are important themes of the play of life. Species surviving in temperate and Arctic shelf seas do so against a scenery dominated by seasonal changes in the size-spectrum of other players. Successful survival in such an environment requires species to ride the big wave of annual productivity as it rolls through the extended size spectrum from phytoplankton to large fish. This wave flattens and broadens as it moves towards higher sizes.We speculate that in a seasonal shelf seas environment the wave shape is such that the Sheldon-Sutcliffe spectrum of equal biomass per log size interval is approximately true as an annual average although it may not be true at any particular moment in the year. Such spectra are structured by biomass being moved up the size spectrum mainly by predation processes, with growth of individuals being a second order process. However, the problem for an individual is to grow up through a size spectrum from its size at birth to its size at reproduction. Hence species need to find survival paths through the fluctuating scenery. This scenery is composed of the biomass of the prey, that of animals of a similar size, and larger predators. The paths followed dictate the life-history strategies of the species.This central problem for sea dwellers in temperate and Arctic shelf seas generates a broad similarity in the choice of life-history strategy for many key players over quite wide geographic areas of the globe. In these seas, strategies of high fecundity, high mortality and high growth rate are particularly common while strategies of low fecundity and parental care are rare for much of the size range. These seas also seem to favour longer trophic chains than terrestrial systems and either several generations per year or multiannual life cycles rather than annual cycles.
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Among the native carnivores threatened by cane toads are small marsupials belonging to the Dasyuridae family – dunnarts, phascogales, and antechinus. Populations of these small dasyurids have declined in Kakadu National Park since toads invaded, despite the concurrent loss of their predators – goannas, snakes, and northern quolls (larger dasyurids). 1 This recent collapse in small mammals could be due to several causal agents – changes to fire regimes, predation by feral cats and lethal poisoning by cane toads.