Genetic diversity of crop plants resulting from breeding and selection is preserved in gene banks. Utilization of such materials for further crop improvement depends on knowledge of agronomic performance and useful traits, which is usually obtained by phenotypic evaluation. Associations between DNA markers and agronomic characters in collections of crop plants would (i) allow assessment of the genetic potential of specific genotypes prior to phenotypic evaluation, (ii) identify superior trait alleles in germplasm collections, (iii) facilitate high resolution QTL mapping and (iv) validate candidate genes responsible for quantitative agronomic characters. The feasibility of association mapping was tested in a gene bank collection of 600 potato cultivars bred between 1850 and 1990 in different countries. The cultivars were genotyped with five DNA markers linked to previously mapped QTL for resistance to late blight and plant maturity. Specific DNA fragments were tested for association with these quantitative characters based on passport evaluation data. Highly significant association with QTL for resistance to late blight and plant maturity was detected with PCR markers specific for R1, a major gene for resistance to late blight, and anonymous PCR markers flanking the R1 locus at 0.2 Centimorgan genetic distance. The marker alleles associated with increased resistance and later plant maturity were traced to an introgression from the wild species S. demissum. These DNA markers are the first marker that are diagnostic for quantitative agronomic characters in a large collection of cultivars.
Peru contains about half of the described wild potato taxa, and many of these are not yet preserved in genebanks. This paper reports results of the second of a series of five planned collecting expeditions to Peru. Collections were made in the central Peruvian departments of Ancash, Huancavelica, La Libertad, and Lima, from March 8 to April 25,1999. They follow collections in 1998 in the southern Peruvian departments of Apurimac, Arequipa, Cusco, Moquegua, Puno, and Tacna. We collected 101 germplasm accessions, including first germplasm collections of the following 22Solanum taxa:Solanum amayanum, S. anamatophilum, S. arahuayum (lost in germplasm increase),S. augustii, S. bill- hookeri, S. cantense, S. chavinense, S. chomatophilum var. subnivale, S. chrysoflorum, S. gracilifrons, S. hapalos um, S. huarochiriense, S. hypacrarthrum, S.jalcae, S. moniliforme, S. multiinterruptum f. longipilosum, S. multiinterruptum var. machaytambinum, S. peloquinianum, S. rhombilanceolatum, S. simplicissimum, S. taulisense (lost in germplasm increase), andS. wittmackii. In addition, new collections were made of the under-collected speciesS. hastiforme (three collections). The above taxonomy is that used in planning our expedition, that we compare to a new treatment of Peruvian wild potatoes published by C. Ochoa in 1999. This paper reports the collection and new species identifications of the 1999 collections, and germplasm conservation and survival of the 1998 and 1999 collections. In addition, chromosome counts are provided for 134 accessions from the 1998 and 1999 expeditions, including first reports forS. chomatophilum var. subnivale (2n = 2x = 24),S. megistacrolobum subsp.purpureum (2n = 2x = 24), andS. multiinterruptum var.multiinterruptum f.albiflorum (2n = 2x = 24); we also report the first triploid count of an accession ofS. immite.
Wild potato ( Solanum sect. Petota) germplasm has been collected in Mexico on nine major expeditions, as determined by 20 collections or more from each expedition currently at the United States potato genebank, the National Research Support Program-6 (NRSP-6). These have resulted in 609 accessions with good collection data. In addition, NRSP-6 has germplasm of approximately 90 other Mexican collections that are unspecific regarding date or place of collection. This expedition was funded to collect those remaining collections with no or little germplasm: Solanum clarum , S. x edinense, S. hintonii, S. hjertingii var. physaloides, S. leptosepalum, S. lesteri, S. macropilosum, S. x michoacanum, S. x sambucinum , and S. stenophyllidium . In addition, some species and species groups (species groups indicated in parentheses) have unresolved taxonomic problems that needed clarification by additional field collections. These are ( S. agrimonifolium and S. oxycarpum), (S. brachycarpum, S. guerreroense, S. hougasii , and S. iopetalum - the S. brachycarpum complex), ( S. fendleri, S. papita, S. stoloniferum - the S. stoloniferum complex), S. leptosepalum , and S. macropilosum . We conducted a wild potato germplasm collecting expedition in Mexico from August 22 to October 31, 1997. Our 103 collections, 71 as germplasm collections, provide the first germplasm samples for S. hjertingii var. physaloides , S. leptosepalum , and S. macropilosum . They provide additional germplasm of the rare species S. clarum, S. x edinense, S. lesteri, S. x michoacanum, S. x sambucinum , and S. stenophyllidium . We additionally gathered germplasm and field data to help resolve taxonomic difficulties in S. agrimonifolium and S. oxycarpum , the S. brachycarpum complex, and the S. stoloniferum complex.