Graph Neural Networks have been widely employed for multimodal fusion and embedding. To overcome over-smoothing issue, residual connections, which are designed for alleviating vanishing gradient problem in NNs, are adopted in Graph Neural Networks (GNNs) to incorporate local node information. However, these simple residual connections are ineffective on networks with heterophily, since the roles of both convolutional operations and residual connections in GNNs are significantly different from those in classic NNs. By considering the specific smoothing characteristic of graph convolutional operation, deep layers in GNNs are expected to focus on the data which can't be properly handled in shallow layers. To this end, a novel and universal Difference Residual Connections (DRC), which feed the difference of the output and input of previous layer as the input of the next layer, is proposed. Essentially, Difference Residual Connections is equivalent to inserting layers with opposite effect (e.g., sharpening) into the network to prevent the excessive effect (e.g., over-smoothing issue) induced by too many layers with the similar role (e.g., smoothing) in GNNs. From the perspective of optimization, DRC is the gradient descent method to minimize an objective function with both smoothing and sharpening terms. The analytic solution to this objective function is determined by both graph topology and node attributes, which theoretically proves that DRC can prevent over-smoothing issue. Extensive experiments demonstrate the superiority of DRC on real networks with both homophily and heterophily, and show that DRC can automatically determine the model depth and be adaptive to both shallow and deep models with two complementary components.

Although existing Graph Neural Networks (GNNs) based on message passing achieve state-of-the-art, the over-smoothing issue, node similarity distortion issue and dissatisfactory link prediction performance can’t be ignored. This paper summarizes these issues as the interference between topology and attribute for the first time. By leveraging the recently proposed optimization perspective of GNNs, this interference is analyzed and ascribed to that the learned representation in GNNs essentially compromises between the topology and node attribute. To alleviate the interference, this paper attempts to break this compromise by proposing a novel objective function, which fits node attribute and topology with different representations and introduces mutual exclusion constraints to reduce the redundancy in both representations. The mutual exclusion employs the statistical dependence, which regards the representations from topology and attribute as the observations of two random variables, and is implemented with Hilbert-Schmidt Independence Criterion. Derived from the novel objective function, a novel GNN, i.e., Graph Neural Network Beyond Compromise (GNN-BC), is proposed to iteratively updates the representations of topology and attribute by simultaneously capturing semantic information and removing the common information, and the final representation is the concatenation of them. The performance improvements on node classification and link prediction demonstrate the superiority of GNN-BC on relieving the interference.