Small-angle neutron scattering, dielectric spectroscopy, and dynamic mechanical analysis data are reported for composites of isotactic polypropylene (IPP) with graphene nanoparticles (GNP) and nanographite. In various samples, the volume of the IPP matrix with a high degree of crystallinity contains GNP with concentrations of 0.7 and 1.8 wt
Ferritin-based hybrids are large 24-subunit macromolecules of megadalton scale have prospective applications ranging from drug delivery to recombinant vaccines, however, their rational design is challenging. Here, we architectured hybrids based on ferritin subunits from Helicobacter pylori and ones fused with a homolog of the Small Ubiquitin-like Modifier protein. We firstly revealed the stochastic nature of bacterial ferritin-based hybrids self-assembly by observing a sequential range of stoichiometries at totally different sample preparation procedures: coexpression in Escherichia coli cells and pH-dependent dis/reassembly. We developed an approach of quantitative evaluation of stoichiometry distribution by using a model based on random, unambiguous, and stoichiometry-independent assembly of hexamers into 24-meric hybrid globules. We identified the presence of a heterodimer and found unexpectedly disfavored stoichiometries of hexamers, which determined the narrowing of structural diversity patterns of 24-mers and shifted the stoichiometry distribution from the random one. Our findings provide new insights into the molecular mechanisms governing the shift in structural diversity patterns of ferritin-based hybrid globules. Finally, the combination of our model system and the hexamer-based approach provides a robust platform for the rational design of ferritin-based systems, with potential applications in drug delivery, structure-based immunogen design, and beyond.
Basing on the data of small-angle neutron scattering for the nanocomposite composed of fullerene C60 (16.5 wt. %) in the matrix of isotactic polypropylene, we received information on clusterization of nanoparticles and defined their geometric parameters and dimensionality. In this paper, we propose interpretation of particle aggregation possessing the properties of surface fractal in the size range up to 80 nm observed using small-angle neutron scattering method. Basing on the well-known theories of defect structures of a fullerene molecule C60 in non-Euclidean metrics, in particular, of disclinations and monopole in two-dimensional spherical Gödel space—time, we formulate a lattice version for the action of monopole gas, in which with the lattice Monte Carlo method, using abelian projection, we estimate the energy of monopole currents at different monopole concentrations. In frames of the proposed model, it is possible to calculate fractal properties of the fullerene C60 in a polymer composite and also to interpret evolution of disclinations.
HYPOTHESIS:The formation of micellar aggregates and the changes in their morphology are crucial for numerous practical applications of surfactants. However, a proper structural characterization of complicated micellar nanostructures remains a challenge. This paper demonstrates the advances of cryo-electron tomography (cryo-ET) in revealing the structural characteristics that accompany the evolution of surfactant aggregates. EXPERIMENTS:By using cryo-ET in combination with cryo-transmission electron microscopy (cryo-TEM), small-angle neutron scattering (SANS), and rheometry, studies were carried out on a model system composed of zwitterionic and nonionic surfactants. In this system, the molecular packing parameter was increased gradually by increasing the molar fraction of nonionic surfactant. FINDINGS:A series of structural transformations was observed: linear wormlike micelles (WLMs) → branched WLMs → saturated network of multiconnected WLMs → perforated vesicles (stomatosomes). The transformations occur through an increase in the number of branches at the expense of cylindrical subchains and semispherical endcaps. Exponential distribution of subchains length was confirmed experimentally for multiconnected saturated networks. The stomatosomes were formed when the length of subchains becomes much shorter than the persistence length, causing the three-dimensional (3D) structure to transform into a two-dimensional (2D) membrane. This work identifies the mechanism of the structural changes, which can be further used to design various surfactant self-assemblies.
Based on small angle neutron-scattering data from a nanocomposite composed of fullerene C60 (16.5 wt
Combining small-angle neutron scattering (SANS), small-angle X-ray scattering (SAXS), and densitometric measurements, we have studied the interactions of the divalent cations Ca2+ and Mg2+ with the lipid vesicles prepared of a mixed-chain palmitoyl-oleoyl-phosphatidylcholine (POPC) at 25°C. The structural parameters of the POPC bilayer, such as the bilayer thickness, lateral area, and volume per lipid, displayed no changes upon the ion addition at concentrations up to 30 mM and minor changes at > 30 mM Ca2+ and Mg2+, while some decrease in the vesicle radius was observed over the entire concentration range studied. This examination allows us to validate the concept of lipid–ion interactions governed by the area per lipid suggested previously and to propose the mixed mode of those interactions that emerge in the POPC vesicles. We speculate that the average area per POPC lipid that corresponds to the cutoff length of lipid–ion interactions generates an equal but opposite impact on ion bridges and separate lipid–ion pairs. As a result of the dynamic equilibrium, the overall structural properties of bilayers are not affected. As the molecular mechanism proposed is affected by the structural properties of a particular lipid, it might help us to understand the fundamentals of processes occurring in complex multicomponent membrane systems.
Conducting polymers have wide technological applications in sensors, actuators, electric and optical devices, solar cells etc. To improve their operational performance, mechanical, thermal, electrical and optical properties, such polymers are doped with carbon allotrope nanofillers. Functionality of the novel nanocomposite polymers may be stipulated by size characteristics of nanoparticles and the polymer, different physical effects like charge transfer in such objects etc. We characterize and analyze structure, elastic, electric properties and of novel polymer nanocomposites, isotactic polypropylene (iPP) with high crystallinity, doped with graphene nanoplates (GNP) and nanographite particles at different concentrations and sizes about 100 nm, basing on the results of dynamic mechanical analysis (DMA), dielectric spectroscopy, small-angle neutron scattering (SANS) and theoretical modeling. Carbon NPs aggregated in fractal objects in the bulk of iPP change its mechanical plastic, elastic and electric properties comparing with pristine polymer. We study modification of nanofiller morphology with the concept of Cosserat elasticity which involves description of the behavior of linear topological defects caused aggregation of nanographite and GNPs. We supply our experimental data with numerical simulations on the lattice in frames of the model of Cosserat elasticity to estimate some mechanical characteristics of the whole composite iPP.
We study the aggregation of carbon allotrope nanofillers in the matrix of isotactic polypropylene with direct small-angle neutron scattering measurements. With the ATSAS software, we analyzed the data and determined the fractal shape, dimension, and sizes of nanofiller aggregation in the bulk of isotactic polypropylene over the range of the scattering angles. We estimated the volume distributions and aggregation of different types of carbon nanofillers at different concentrations: nanographite, graphene nanoplatelets (GNP), fullerenes, single-walled carbon nanotubes (SWCNT), multi-walled carbon nanotubes (MWCNT) and binary fillers MWCNT/GNP. We reconstructed the shape of nanoscale particles and aggregates of a few nanofillers SWCNT, MWCNT and MWCNT/GNP and found that the systems are polydisperse; nanofillers associate in the volume of isotactic polypropylene as fractal dense aggregates with rugged surface, their sizes exceeding original dimensions of nanofillers several times.
Membrane proteins (MPs) play vital roles in the function of cells and are also major drug targets. Structural information on proteins is vital for understanding their mechanism of function and is critical for the development of drugs. However, obtaining high-resolution structures of membrane proteins, in particular, under native conditions is still a great challenge. In such cases, the low-resolution methods small-angle X-ray and neutron scattering (SAXS and SANS) might provide valuable structural information. However, in some cases small-angle scattering (SAS) provides ambiguous ab initio structural information if complementary measurements are not performed and/or a priori information on the protein is not taken into account. Understanding the nature of the limitations may help to overcome these problems. One of the main problems of SAS data analysis of solubilized membrane proteins is the contribution of the detergent belt surrounding the MP. Here, a comprehensive analysis of how the detergent belt contributes to the SAS data of a membrane-protein complex of sensory rhodopsin II with its cognate transducer from Natronomonas pharaonis ( Np SRII– Np HtrII) was performed. The influence of the polydispersity of Np SRII– Np HtrII oligomerization is the second problem that is addressed here. It is shown that inhomogeneity in the scattering length density of the detergent belt surrounding a membrane part of the complex and oligomerization polydispersity significantly impacts on SAXS and SANS profiles, and therefore on 3D ab initio structures. It is described how both problems can be taken into account to improve the quality of SAS data treatment. Since SAS data for MPs are usually obtained from solubilized proteins, and their detergent belt and, to a certain extent, oligomerization polydispersity are sufficiently common phenomena, the approaches proposed in this work might be used in SAS studies of different MPs.
Alzheimer's disease is a neurodegenerative brain disease, where pathological hallmarks are senile plaques consisting primarily of amyloid-beta peptides. The investigations, however, point out not only the importance of physico-chemical properties of peptides themselves, but the membranes as the targeting environment as well. Commensurately, the interrogation approaches are required to focus on these systems at various length scales ranging from the submolecular and molecular levels relevant to the structures of peptides and/or membrane lipids locally, to the supermolecular levels covering the aggregates and large structures ensuing from the peptide-membrane interactions. In this chapter, we are summarizing the previous studies that look at complex model and biological membranes using a variety of experimental and theoretical methods based on, or complementing, the scattering techniques. We attempt to examine the effects modulated by the presence of Aβ peptides, and more importantly to determine the modes of interaction between membranes and peptides.
Сформулирована и решена задача определения начальных условий, обеспечивающих однозначность математического моделирования электрического разряда в воде. Разработан метод определения начальных величин характеристик разряда, обеспечивающий их согласование между собой. Эффективность метода продемонстрирована на примере электрического разряда в воде, для которого известны экспериментальные данные. Определено влияние произвольных параметров электроразрядной системы на результаты ее математического моделирования. Проведенные исследования позволили существенно повысить адекватность разработанной ранее математической модели физическим процессам разряда в воде на его начальной стадии.
The structure and dynamics of membranes depend on many external and internal factors that in turn determine their biological functions. One of the widely accepted and studied characteristics of biomembranes is their fluidity. We research a simple system with variable fluidity tweakable via its composition. The addition of cholesterol is employed to increase the order of lipid chains, thus decreasing the membrane fluidity, while melatonin is shown to elevate the chain disorder, thus also the membrane fluidity. We utilize the densitometric measurements to show a shift of studied systems closer or further from the gel-to-fluid phase transition. The structural changes represented by changes to membrane thickness are evaluated from small angle neutron scattering. Finally, we look at the ability of the two additives to control the interactions between membrane and amyloid-beta peptides. Our results suggest that fluidizing effect of melatonin can promote an insertion of peptide within the membrane interior. Intriguingly, the latter structure relates possibly to an Alzheimer's disease preventing mechanism postulated in the case of melatonin.
Using a multidetector system on the YuMO spectrometer allows shortening the time of measurements. The quantitative comparison of the measurement time using one and two-detector mode is done. The time range for experiments was from several minutes up to 12 hours. It was shown that two-detector system shortens more than twice the time of the measurement. While making a structural investigation using advanced software the two-detector system allows to treat the data at a qualitatively new level. An example illustrating the features of the channels choice and measurement time on the spectrometer was shown. The results of this paper could be used when planning the experiments on the YuMO spectrometer, for modernization of the installation and for equipment using time-of-flight method.