Introduction: Identifiable superficial external landmarks can be used to determine the exact location of the internally located dural venous sinuses, for neurosurgical procedures. Several studies have been conducted to determine a standard method or a consistent reliable landmark, but all reported variations and inconsistencies with the examined landmarks. This study evaluated the relationship between the attachment site of the semispinalis capitis muscles on the external aspect of the skull and the internally located transverse dural venous sinuses. Methods: Fifty-one South African skulls were used in this study. The Micro-focus X-ray Radiography and Tomography (MIXRAD) system at Necsa (Nuclear Energy Corporation South Africa) was used to scan and create three-dimensional images of each skull specimen. Pre-determined reference points were placed on the reconstructed images with the VGStudio Max volume rendering software. The relevant distances and locations of the reference points were measured and documented. Results: The muscle attachment site was located inferior to the transverse sinuses in all the skulls with a mean distance of 15.99 mm (left side) and 19.43 mm (right side). A statistically significant difference was found between all the measurements comparing the left- and right sides, however, no such difference was found between males and females. Conclusion: The apical attachment of the semispinalis capitis muscle is a good indicator for the internally located transverse dural venous sinus. This study indicates that a point of entry 8-10 mm inferior to this muscle attachment site be used, for safe access to the internal aspect of the posterior cranium.

Homo erectus s.l. is key for deciphering the origin and subsequent evolution of genus Homo. However, the characterization of this species is hindered by the existence of multiple variants in both mainland and insular Asia, as a result of divergent chronogeographical evolutionary trends, genetic isolation, and interbreeding with other human species. Previous research has shown that cochlear morphology embeds taxonomic and phylogenetic information that may help infer the phylogenetic relationships among hominin species. Here we describe the cochlear morphology of two Indonesian H. erectus individuals (Sangiran 2 and 4), and compare it with a sample of australopiths, Middle to Late Pleistocene humans, and extant humans by means of linear measurements and both principal components and canonical variates analyses performed on shape ratios. Our results indicate that H. erectus displays a mosaic morphology that combines plesiomorphic (australopithlike) features (such as a chimplike round cochlear cross section and low cochlear thickness), with derived characters of later humans (a voluminous and long cochlea, possibly related to hearing abilities)—consistent with the more basal position of H. erectus. Our results also denote substantial variation between the two studied individuals, particularly in the length and radius of the first turn, as well as cross-sectional shape. Given the small size of the available sample, it is not possible to discern whether such differences merely reflect intraspecific variation among roughly coeval H. erectus individuals or whether they might result from greater age differences between them than currently considered. However, our results demonstrate that most characters found in later humans were already present in Indonesian H. erectus, with the exception of Neanderthals, which display an autapomorphic condition relative to other Homo species.

Geological and geophysical models are essential for developing reliable mine designs and mineral processing flowsheets. For mineral resource assessment, mine planning, and mineral processing, a deeper understanding of the orebody's features, geology, mineralogy, and variability is required. We investigated the gold-bearing Black Reef Formation in the West Rand and Carletonville goldfields of South Africa using approaches that are components of a transitional framework toward fully digitized mining: (1) high-resolution 3D reflection seismic data to model the orebody; (2) petrography to characterize Au and associated ore constituents (e.g., pyrite); and (3) 3D micro-X-ray computed tomography (µCT) and machine learning to determine mineral association and composition. Reflection seismic reveals that the Black Reef Formation is a planar horizon that dips < 10° and has a well-preserved and uneven paleotopography. Several large-scale faults and dikes (most dipping between 65° and 90°) crosscut the Black Reef Formation. Petrography reveals that gold is commonly associated with pyrite, implying that µCT can be used to assess gold grades using pyrite as a proxy. Moreover, we demonstrate that machine learning can be used to discriminate between pyrite and gold based on physical characteristics. The approaches in this study are intended to supplement rather than replace traditional methodologies. In this study, we demonstrated that they permit novel integration of micro-scale observations into macro-scale modeling, thus permitting better orebody assessment for exploration, resource estimation, mining, and metallurgical purposes. We envision that such integrated approaches will become a key component of future geometallurgical frameworks.

The fossiliferous deposits within the lower-lying Jacovec Cavern in the locality of Sterkfontein yielded valuable hominin remains, including the StW 578 specimen. Because StW 578 mainly preserves the calotte, the taxonomic status of this specimen has been a matter of discussion. Within this context, here we employed high-resolution microtomography and a landmark-free registration method to explore taxonomically diagnostic features in the external surface of the StW 578 calotte. Our comparative sample included adult humans and common chimpanzees as well as one Australopithecus africanus specimen (Sts 5). We partially restored the StW 578 calotte digitally and compared it to extant specimens and Sts 5 using a landmark-free registration based on smooth and invertible surface deformation. Our comparative shape analysis reveals morphological differences with extant humans, especially in the frontal bones, and with extant chimpanzees, as well as intriguing specificities in the morphology of the StW 578 parietal bones. Lastly, our study suggests morphological proximity between StW 578 and Sts 5. Given the intimate relationship between the brain and the braincase, as well as the integration of the hominin face and neurocranium, we suggest that cranial vault shape differences between StW 578 and extant humans, if confirmed by further analyses, could be either explained by differences in brain surface morphology or in the face. Besides providing additional information about the morphology of the Jacovec calotte that will be useful in future taxonomic discussion, this study introduces a new protocol for the landmark-free analysis of fossil hominin cranial shape. Significance: We provide further information on the enigmatic fossil specimen StW 578. We introduce a new approach for the morphological study of fossil hominin crania. We highlight morphological similarities between StW 578 and ‘Mrs Ples’.

Soil aggregation is regarded as a key indicator of soil quality and behaviour that is mainly influenced by land use and management. There is lack of information on the effects of conservation agriculture (CA) on soil aggregation in low soil organic carbon (SOC) soils of South Africa. This study therefore aimed to quantify the effect of tillage, crop rotation and crop residue management on aggregate stability, binding agents and the resulting aggregate microstructure in a sweet sorghum-based cropping system in a low organic carbon soil. Two tillage levels; no-till (NT) and conventional tillage (CT), two crop rotations, i.e., sweet sorghum-grazing vetch-sweet sorghum (S-V-S) and sweet sorghum-fallow-sweet sorghum (S-F-S) and three crop residue retention levels, i.e., 0%, 15 % and 30 % were tested. The aggregate microstructure was quantified on aggregates of similar to 5 mm diameter with micro-focus Xray computed tomography (mu XCT) and image analysis was done using VGstudio MAX 3.2. Aggregate stability, soil organic carbon and glomalin related soil protein content (GRSP) were statistically higher under NT than in CT. GRSP was also enhanced by 30 % residue retention compared to other residue management practices. NT and CT accompanied by 30 % residue retention had the highest total porosity. NT + S-V-S + 30 % treatment combination generally had higher observed total porosity, higher frequency of pores within each pore class and denser microstructure visualisation. This study showed that tillage is the main factor that influences soil aggregation followed by residue management. Thus, application of NT + S-V-S+ 30 % enhanced soil quality in low SOC soils after three years. The study also demonstrated that aggregate stability is linked to aggregate microstructure and regular pores are dominated in degraded soils with low SOC.

Abstract Copper-sulfides within carbonatites and phoscorites of the Phalaborwa Igneous Complex, South Africa, have been investigated since the middle of the 20th Century. However, aspects of ore formation have remained unclear. This study examines the mechanisms involved in Cu-sulfide mineralisation by micro-focus X-ray computed tomography as applied to sulfide-rich drill core samples. Several texturally distinct assemblages of magmatic sulfides can be identified, including: (1) <500 μm rounded bornite and chalcopyrite grains disseminated within the gangue; (2) elongated mm-scale assemblages of chalcopyrite and bornite; and (3) mm-to-cm thick chalcopyrite cumulates. Chalcopyrite veins were also observed, as well as late-stage valleriite, documenting late-stage fluid circulation within the pipe, and alteration of magmatic and hydrothermal sulfides along fractures within the gangue, respectively. The results of micro-focus X-ray computed tomography indicate that magmatic sulfides are sub-vertically aligned. Spatial variability of the sulfide assemblages suggests that textural changes within sulfide layers reflect fluctuating magma flow rate during emplacement of carbonatite–phoscorite magmas, through coalescence or breakup of sulfide liquid droplets during ascent. Modal sulfide abundances, especially for disseminated assemblages, differ from one carbonatite–phoscorite layer to another, suggesting a strong control of the mechanical sorting in the formation of Cu-sulfide textures within the Loolekop carbonatite. The alternation of carbonatite and phoscorite within the intrusion suggest that the Loolekop Pipe was emplaced through a series of successive magma pulses, which differentiated into carbonatite and phoscorite by melt immiscibility/progressive fractional crystallisation and pressure drop. Three-dimensional textural analysis represents an effective tool for the characterisation of magma flow and is useful for the understanding of magmatic processes controlling sulfide liquid-bearing phoscorite–carbonatite magmas.

Abstract The relative contributions of adaptation and genetic drift to morphological diversification of the skulls of echolocating mammals were investigated using two horseshoe bat species, Rhinolophus simulator and R. cf. simulator, as test cases. We used 3D geometric morphometrics to compare the shapes of skulls of the two lineages collected at various localities in southern Africa. Size and shape variation was predominantly attributed to selective forces; the between‐population variance (B) was not proportional to the within‐population variance (W). Modularity was evident in the crania of R. simulator but absent in the crania of R. cf. simulator and the mandibles of both species. The skulls of the two lineages thus appeared to be under different selection pressures, despite the overlap in their distributions. Difference in the crania of R. cf. simulator was centered largely on the nasal dome region of R. cf. simulator but on the cranium and mandibles of R. simulator. It is likely that the size and shape of the nasal dome, which acts as a frequency‐dependent acoustic horn, is more crucial in R. cf. simulator than in R. simulator because of the higher echolocation frequencies used by R. cf. simulator. A larger nasal dome in R. cf. simulator would allow the emission of higher intensity pulses, resulting in comparable detection distances to that of R. simulator. In contrast, selection pressure is probably more pronounced on the mandibles and cranium of R. simulator to compensate for the loss in bite force because of its elongated rostrum. The predominance of selection probably reflects the stringent association between environment and the optimal functioning of phenotypic characters associated with echolocation and feeding in bats.

BACKGROUND: Sub-Saharan neurosurgeons most likely need to perform invasive procedures without the latest imaging and navigation technology in the operating room. Therefore, these surgeons need to utilize other methods such as superficial surface landmarks for neuro-navigation. Bony landmarks, including the inion and asterion, are commonly used during invasive procedures to pinpoint the location of the confluence of sinuses and transverse-sigmoid sinus junction, respectively. The purpose of this study was to investigate whether the inion and asterion can be used as superficial landmarks for the confluence of sinuses and the transverse-sigmoid sinus junction, respectively, in a South African population. METHODS: Fifty South African human skulls were used (25 male, 25 female). The micro-focus X-ray radiography and tomography facility (MIXRAD) at Necsa scanned and created three-dimensional virtual images of the skull specimens. Reference points were then inserted on the images and the relation between bony landmarks and venous sinuses was documented. RESULTS: The inion was directly related to the confluence of sinuses in 4% of the sample, whereas the asterion was directly related to the transverse-sigmoid sinus junction in 28% of the cases, on both the right and left sides. CONCLUSIONS: This study confirmed that neither the inion, nor the asterion, are directly related the confluence of sinuses and transverse-sigmoid sinus junction, respectively. These bony landmarks are more likely to be located either inferior, or not related at all, to the investigated dural venous sinuses.

Lightning fatality identification relies primarily on soft tissue traumatic pattern recognition, prohibiting cause of death identification in cases of full skeletonisation. This study explores the effects of high impulse currents on human bone, simulating lightning-level intensities and characterising electrically induced micro-trauma through conventional thin-section histology and micro-focus X-ray computed tomography (μXCT). An experimental system for high impulse current application was applied to bone extracted from donated cadaveric lower limbs (n = 22). μXCT was undertaken prior to and after current application. Histological sections were subsequently undertaken. μXCT poorly resolved micro-trauma compared to conventional histology which allowed for identification and classification of lightning-specific patterns of micro-trauma. Statistical analyses demonstrated correlation between current intensity, extent and damage typology suggesting a multifaceted mechanism of trauma propagation - a combination of electrically, thermally and pressure induced alterations. This study gives an overview of high impulse current trauma to human bone, providing expanded definitions of associated micro-trauma.

X-ray computed tomography (XCT) is becoming one of the most important techniques in the geosciences. The technique relies on linear attenuation coefficient differences in order to reveal the internal structure of the rocks. In this work, we present a new excel macro tool, called MXLAC, which is a data bank with an excel interface that uses density, X-ray energy and the mineral chemical formula to allow users to calculate mineral linear attenuation coefficients that can then be used to determine discrimination between mineral pairs. Elements within a mineral and specified by the chemical formula, determine how the X-ray beam is attenuated. Analysis of a variety of scanned mineral pairs with similar densities and attenuation coefficients indicates that an attenuation coefficient difference of greater than or equal to 6% at 45.5 keV effective X-ray energy is required for effective discrimination between two minerals using XCT with single energy scanning. This means that mineral pairs, such as quartz and pyrophyllite cannot be discriminated using the current XCT instruments due to the fact that the attenuation coefficient difference is less than 1.9% at 45.5 keV effective X-ray energy. Garnets and a variety of other minerals were used as examples to illustrate the importance of knowing the actual chemical formula of the mineral to demonstrate whether they can be partially or fully discriminated from each other.

Functional morphology of the atlas reflects multiple aspects of an organism’s biology. More specifically, its shape indicates patterns of head mobility, while the size of its vascular foramina reflects blood flow to the brain. Anatomy and function of the early hominin atlas, and thus, its evolutionary history, are poorly documented because of a paucity of fossilized material. Meticulous excavation, cleaning and high-resolution micro-CT scanning of the StW 573 (‘Little Foot’) skull has revealed the most complete early hominin atlas yet found, having been cemented by breccia in its displaced and flipped over position on the cranial base anterolateral to the foramen magnum. Description and landmark-free morphometric analyses of the StW 573 atlas, along with other less complete hominin atlases from Sterkfontein (StW 679) and Hadar (AL 333-83), confirm the presence of an arboreal component in the positional repertoire of Australopithecus . Finally, assessment of the cross-sectional areas of the transverse foramina of the atlas and the left carotid canal in StW 573 further suggests there may have been lower metabolic costs for cerebral tissues in this hominin than have been attributed to extant humans and may support the idea that blood perfusion of these tissues increased over the course of hominin evolution.

Advancements in modern mineral processing has been driven by technology and fuelled by market economics of supply and demand. Over the last three decades, the demand for various minerals has steadily increased, while the mineral processing industry has seen an unavoidable increase in the treatment of complex ores, continuous decline in plant feed grade and poor plant performance partly due to blending of ores with dissimilar properties. Despite these challenges, production plant data that are routinely generated are usually underutilised. In this contribution and aligned with the direction of the 4th industrial revolution, we highlight the value of legacy metallurgical plant data and the concept of a dry laboratory approach. This study is presented in two parts. In the current paper (Part I), a comprehensive review of the potential for the combination of modern analytical technology with data analytics to generate a new competence for process optimisation are provided. To demonstrate the value of data within the extractive metallurgy discipline, we employ data analytics and simulation to examine gold plant performance and the flotation process in two separate case studies in the second paper (Part II). This was done with the aim of showcasing relevant plant data insights, and extract parameters that should be targeted for plant design and performance optimisation. We identify several promising technologies that integrate well with existing mineral processing plants and testing laboratories to exploit the concept of a dry laboratory, in order to enhance pre-existing mineral processing chains. It also sets the passage in terms of the value of innovative analysis of existing and simulation data as part of the new world of data analytics. Using data- and technology-driven initiatives, we propose the establishment of dry laboratories and data banks to ultimately leverage integrated data, analytics and process simulation for effective plant design and improved performance.

Mineral textural quantification methods have become critical in both geosciences and mineral processing as mineral texture is a critical factor contributing to ore variability. However, the lack of objective mineral texture classification has made quantification difficult. The aim of this study is therefore to investigate the robustness of applying the gray level co-occurrence matrices (GLCM) to 3-dimensional (3D) gray scale images measured by X-ray computed tomography (XCT) for the quantification of mineral texture in 3D. The data quality of the GLCM outputs like statistics, heat maps and histograms in response to changes in XCT conditions such as artefacts, resolution, and calibration was tested. The response of the GLCM outputs with respect to different mineral texture types with anisotropic features and inter-sample variability was also explored. The methodology included testing core sizes of 26, 19, 14, and 6 mm diameter. Calibration was tested using copper and tungsten wires. The study demonstrated the versatility of the method for different sample types. Inter-sample calibration and optimal scanning conditions (quality and integrity) were also demonstrated, and a basic link between the 3D GLCM statistical descriptors with the mineral texture features of rocks was established. The 3D mineral texture method can potentially bypass the XCT segmentation process for direct automation of 3D mineral texture information.

The source of gold in the ca. 2.66 Ga Black Reef Formation (BRF) has been investigated and constrained through petrographic, mineralogical, geochemical, and high-resolution three-dimensional reflection seismic data combined with drill core and underground geological mapping. The BRF is a strong seismic marker and consists of carbonaceous shale, quartz arenite, and conglomerate. Gold grade in the BRF is primarily controlled by the nature of the host conglomerates. Most of the gold in the BRF conglomerate occurs in native form, and its morphology is highly heterogeneous. Gold was initially introduced through mechanical recycling of underlying Witwatersrand reefs, followed by short-range (millimeter- to centimeter-scale) postdepositional alteration/remobilization associated with the Bushveld Complex and the Vredefort meteorite impact. Although the BRF was subjected to high postdepositional fluid circulation facilitated by high fracture density, the volume of dissolved gold was probably too small to form a large gold deposit, except in areas around the Black Reef/Witwatersrand reefs subcrop positions. Findings from this study demonstrate the importance of both sedimentological controls and impact-related structures in the formation of paleoplacer gold deposits during Neoarchean times.

X-ray computed tomography is a non-destructive 3D analytical technique, which in recent years has gained more widespread applications to characterise the internal structure of materials in minerals processing and metallurgical studies. Successful application of the technique relies on effective X-ray penetration. Ore samples with high average specific gravities (e.g. iron ore, massive sulfide ores) inhibit X-Ray penetration causing beam hardening artefacts that reduce data quality and limit further analysis. This contribution presents a practical way to evaluate the degree of beam hardening using a case study iron ore sample. The method quantifies the degree of beam hardening that leads to a loss of sample information, through comparing the known pore surface area of an aluminium standard sample with that of an iron ore sample. This comparison is defined as a %Error. Porosity and sample mineralogy are confidently quantified when the %Error is less than 10%. Above 10%, there is inconsistent loss of sample information (porosity and relatively low dense sample mineralogy) and the results from the volumes cannot be trusted which indicates that smaller sample sizes need to be scanned. This practical method can be routinely applied in other applications and samples with density higher than iron ore.

Palaeontological Scientific Trust (PAST) Occitanie Region and the French Ministry of Higher Education and Research

Virtual µXCT 3D images of the semicircular canals obtained from Sts 564 and Sts 565 are shown in Figure 1.