Modern advancements in laboratory and instrumental techniques in astrobiology have improved our life detection capabilities on both Earth and beyond. These advancements have also increased the complexity of data often resulting in datasets that are characterized by complex and non-linear relationships. Machine learning methods are underutilized in astrobiology; however, these methods are extremely effective at revealing structure and patterns in complex datasets when paired with the right algorithms. Here, we employ a series of classification and regression algorithms to predict the abundance of organic carbon (OC) from X-ray fluorescence (XRF) data in dynamic Mars-analog hypersaline lake sediments. More specifically, we constructed models using the random forest (RF), k-nearest neighbors (KNN), support vector machine (SVM), and logistic regression (LR) algorithms. Overall, our trained models showed good performance with predicting the abundance of OC, with accuracies from 80% to 94%. Our results show how applying predictive models to astrobiology datasets can help life detection efforts. Machine learning approaches such as classification and regression algorithms offer insight into complex data while providing agnostic insights, ultimately creating a more efficient search for OC. We applied our trained model on XRF data from Martian soil using PIXL and Odyssey datasets to produce probability predictions of OC abundance. Our predictions show a high probability that OC abundance is low which is comparable to OC data from recently landed missions. These results highlight the potential for machine learning models to be trained on data from analog environments on Earth and then transferred (transfer learning) to extraterrestrial targets.
Diverse microbiota inhabit some of Earth's most extreme arid regions, enduring in environments where survival seems improbable. Despite numerous reports of microorganisms across the Atacama Desert—the oldest and driest desert on Earth—our understanding of how they adapt to extreme conditions in its hyperarid core remains limited. Prior systematic studies of the hyper-arid core have relied upon targeted gene sequencing (e.g., 16S rDNA), limiting inference of microbial community structure and function. Here we show that a diverse core group of microbes can be found in the hyperarid core, enabled by processing of large sample volumes linked to low-input metagenomic sequencing of 50 soil samples along a 450 km south-north transect. Linking gene function to soil geochemistry revealed a tipping point related to potential adaptive strategies. Our findings challenge the notion that microbial activity in the hyperarid core is predominantly transient. Among the diversity of metabolic pathways detected, we found evidence of gene circuits that encode proteins capable of using atmospheric trace gases to produce metabolic water and generate energy. Growing evidence of this previously under-recognized capability may extend the known range of habitability for soil microbial communities, with implications for the search for life beyond Earth, such as on Mars or arid exoplanets.
Long-standing unexplained Venus atmosphere observations and chemical anomalies point to unknown chemistry but also leave room for the possibility of life. The unexplained observations include several gases out of thermodynamic equilibrium (e.g., tens of ppm O2, the possible presence of PH3 and NH3, SO2 and H2O vertical abundance profiles), an unknown composition of large, lower cloud particles, and the "unknown absorber(s)." Here we first review relevant properties of the venusian atmosphere and then describe the atmospheric chemical anomalies and how they motivate future astrobiology missions to Venus.
Life on Earth relies on mechanisms to store heritable information and translate this information into cellular machinery required for biological activity. In all known life, storage, regulation, and translation are provided by DNA, RNA, and ribosomes. Life beyond Earth, even if ancestrally or chemically distinct from life as we know it may utilize similar structures: it has been proposed that charged linear polymers analogous to nucleic acids may be responsible for storage and regulation of genetic information in non-terran biochemical systems. We further propose that a ribosome-like structure may also exist in such a system, due to the evolutionary advantages of separating heritability from cellular machinery. Here, we use a solid-state nanopore to detect DNA, RNA, and ribosomes, and demonstrate that machine learning can distinguish between biomolecule samples and accurately classify new data. This work is intended to serve as a proof of principal that such biosignatures (i.e., informational polymers or translation apparatuses) could be detected, for example, as part of future missions targeting extant life on Ocean Worlds. A negative detection does not imply the absence of life; however, detection of ribosome-like structures could provide a robust and sensitive method to seek extant life in combination with other methods. One Sentence Summary Life, defined as a chemical system capable of Darwinian evolution, likely requires an apparatus to translate heritable instructions into cellular machinery, and we propose to detect this as a biosignature of extant life beyond Earth.
The abundance of potentially habitable hypersaline environments in our solar system compels us to understand the impacts of high-salt matrices and brine dynamics on biosignature detection efforts. We identified and quantified organic compounds in brines from South Bay Salt Works (SBSW), where evapoconcentration of ocean water enables exploration of the impact of NaCl- and MgCl2-dominated brines on the detection of potential biosignature molecules. In SBSW, organic biosignature abundance and distribution are likely influenced by evapoconcentration, osmolyte accumulation, and preservation effects. Bioluminescence assays show that adenosine triphosphate (ATP) concentrations are higher in NaCl-rich, low water activity (aw) samples (<0.85) from SBSW. This is consistent with the accumulation and preservation of ATP at low aw as described in past laboratory studies. The water-soluble small organic molecule inventory was determined by using microchip capillary electrophoresis paired with high-resolution mass spectrometry (µCE-HRMS). We analyzed the relative distribution of proteinogenic amino acids with a recently developed quantitative method using CE-separation and laser-induced fluorescence (LIF) detection of amino acids in hypersaline brines. Salinity trends for dissolved free amino acids were consistent with amino acid residue abundance determined from the proteome of the microbial community predicted from metagenomic data. This highlights a tangible connection up and down the "-omics" ladder across changing geochemical conditions. The detection of water-soluble organic compounds, specifically proteinogenic amino acids at high abundance (>7 mM) in concentrated brines, demonstrates that potential organic biomarkers accumulate at hypersaline sites and suggests the possibility of long-term preservation. The detection of such molecules in high abundance when using diverse analytical tools appropriate for spacecraft suggests that life detection within hypersaline environments, such as evaporates on Mars and the surface or subsurface brines of ocean world Europa, is plausible and argues such environments should be a high priority for future exploration. Key Words: Salts-Analytical chemistry-Amino acids-Biosignatures-Capillary electrophoresis-Preservation. Astrobiology 24, 795-812.
The sulfuric acid clouds of Venus are of high scientific interest due to several intriguing observations from the past decades. These observations are not fully explained with current chemical models. Many hypotheses have been posed to date, including the presence of complex organics or microbial life in the clouds. The possibility of life is primarily supported by the biologically benign temperatures in the cloud layers and is secondarily bolstered by several unresolved cloud-layer atmospheric chemical anomalies. Here we propose that a robust search for signs of life or life itself in the Venusian aerial environment requires a sample return of the cloud particles. We propose a Venus cloud sample return mission concept by performing key trade studies, and evaluating the requirements, feasibility, and technological needs. The baseline mission concept includes a Venus entry system, a balloon for sample collection and ascent in the clouds, a Venus Ascent Vehicle to deliver samples to orbit, a Venus orbiter, and an Earth return system. We present the concept of three critical systems that are the focus of our study: cloud sample collectors, an aerial platform, and a Venus Ascent Vehicle. We found an electrostatic fog collector for low-power, high-efficiency cloud sample capture. The most significant newly identified technology gaps for near-term focused development that we uncovered are the rapid inflation of a large 7000 m3 balloon and navigation and control of the ascent vehicle in a low-visibility and turbulent cloud environment. We discuss the various technologies of the sample return mission that need focused development and have synergies across multiple types of planetary missions.
The RNA World hypothesis posits that RNA was the molecule of both heredity and function during the emergence of life. This hypothesis implies that RNA templates can be copied, and ultimately replicated, without the catalytic aid of evolved enzymes. A major problem with nonenzymatic template-directed polymerization has been the very poor copying of sequences containing rA and rU. Here, we overcome that problem by using a prebiotically plausible mixture of RNA mononucleotides and random-sequence oligonucleotides, all activated by methyl isocyanide chemistry, that direct the uniform copying of arbitrary-sequence templates, including those harboring rA and rU. We further show that the use of this mixture in copying reactions suppresses copying errors while also generating a more uniform distribution of mismatches than observed for simpler systems. We find that oligonucleotide competition for template binding sites, oligonucleotide ligation and the template binding properties of reactant intermediates work together to reduce product sequence bias and errors. Finally, we show that iterative cycling of templated polymerization and activation chemistry improves the yields of random-sequence products. These results for random-sequence template copying are a significant advance in the pursuit of nonenzymatic RNA replication.
We report on the proof-of-concept of a low-mass, low-power method for collecting micron-sized sulfuric acid aerosols in bulk from the atmosphere of Venus. The collection method uses four wired meshes in a sandwich structure with a deposition area of 225 cm2. It operates in two modes: passive and electrostatic. During passive operation, aerosols are gathered on the deposition surface by aerodynamic force. During electrostatic operation, a tungsten needle discharges a high voltage of - 10 kV at the front of the grounded mesh structure. The discharge ionizes aerosols and attracts them to the mesh by Coulomb forces, resulting in improved efficiency and tentative attraction of submicron aerosols. We describe the instrument construction and testing in the laboratory under controlled conditions with aerosols composed of 25%, 50%, 70%, 80%, 90% and 98%* concentration by volume of sulfuric acid, the rest water. We demonstrated the following: (i) both modes of operation can collect the entire range of sulfuric acid solutions; (ii) the collection efficiency increases steadily (from a few percent for water to over 40% for concentrated sulfuric acid) with the increased concentration of sulfuric acid solution in water in both modes; (iii) the relative improvement in the collection of the electrostatic mode decreases as the sulfuric acid concentration increases. We also demonstrated the operation of the instrument in the field, cloud particle collection on Mt. Washington, NH, and crater-rim fumaroles' particle collection on Kīlauea volcano, HI. The collection rate in the field is wind-speed dependent, and we observed collection rates around 0.1 ml[Formula: see text] in low wind environments (1-2 m[Formula: see text]), and around 1 ml[Formula: see text] in stronger wind (7-9 m[Formula: see text]).
Several worlds in our solar system are thought to hold oceans of liquid water beneath their frozen surfaces. These subsurface ice and ocean environments are promising targets in the search for life beyond Earth, but they also present significant new technical challenges to planetary exploration. With a focus on Jupiter's moon Europa, here we (1) identify major benefits and challenges to subsurface ocean world science, (2) provide a multidisciplinary survey of relevant sample handling and life detection technologies, and (3) integrate those perspectives into the Subsurface Science and Search for Life in Ocean Worlds (SSSLOW) concept payload. We discuss scientific goals across three complementary categories: (1) search for life, (2) assess habitability, and (3) investigate geological processes. Major mission challenges considered include submerged operation in high-pressure environments, the need to sample fluids with a range of possible chemical conditions, and detection of biosignatures at low concentrations. The SSSLOW addresses these issues by tightly integrated instrumentation and sample handling systems to enable sequential, complementary measurements while prioritizing preservation of sample context. In this work, we leverage techniques and technologies across several fields to demonstrate a path toward future subsurface exploration and life detection in ice and ocean worlds.
Interest in the exploration of, and the establishment of a human settlement, on Mars is rapidly growing. To accomplish this, rapid transit will be required to bring important supplies and cargo. Current missions to Mars take at least 150 days, which would be too long in case of emergencies or urgent needs. Therefore, we propose the use of a cutting-edge technology that could allow transit times as short as 20 days: laser energy driven light sails. This propulsion method uses a ground-based laser array to propel a small, lightweight spacecraft attached to a light sail to very high speeds, enabling missions that are much faster than current missions. By utilizing a MATLAB model and a laser propulsion computational tool, we visualize and determine the optimal trajectories and departure windows for these missions. We discuss these trajectories and show that these missions are possible during specific launch windows within a 27-month time period between 2030–2032, but have practical challenges within this period as well. During solar conjunction, such rapid transit missions are limited due to the proximity of the sun, but rapid transits are possible during all orbital phases when the transit time requirement is relaxed. Laser arrays capable of generating up to 13 GW are necessary to enable 20-day missions with a 5 kg spacecraft, capable of carrying valuable lightweight cargo to astronauts, near conjunction, but only 0.55 GW is required around opposition. Required spacecraft velocities always exceed the solar system escape velocity and the trajectories are hyperbolic. A significant challenge for future work involves mechanisms and processes for deceleration and entry, descent, and landing. A ground-based laser array on Mars could address some aspects of this challenge, but orbital geometry limits deceleration potential, implying that payloads would need to be robust to large deceleration and impact g-loads. These 20-day missions to Mars can serve as precursors to more complex, distant missions. Spacecraft mass capabilities can be increased while also decreasing transit times by optimizing the laser array and light sail properties. Multiple spacecraft may also be launched and boosted simultaneously to carry more payload and decrease costs. This work is intended to serve as a proof of concept that lightweight payloads can be transported via such missions. Technologies enabling rapid transit missions can be developed in the next several decades and be applied to deep space missions to other celestial bodies and journeys to interstellar space.
Gloeocapsopsis dulcis strain AAB1 is an extremely xerotolerant cyanobacterium isolated from the Atacama Desert (i.e., the driest and oldest desert on Earth) that holds astrobiological significance due to its ability to biosynthesize compatible solutes at ultra-low water activities. We sequenced and assembled the G. dulcis genome de novo using a combination of long- and short-read sequencing, which resulted in high-quality consensus sequences of the chromosome and two plasmids. We leveraged the G. dulcis genome to generate a genome-scale metabolic model ( iGd895 ) to simulate growth in silico . iGd895 represents, to our knowledge, the first genome-scale metabolic reconstruction developed for an extremely xerotolerant cyanobacterium. The model's predictive capability was assessed by comparing the in silico growth rate with in vitro growth rates of G. dulcis , in addition to the synthesis of trehalose. iGd895 allowed us to explore simulations of key metabolic processes such as essential pathways for water-stress tolerance, and significant alterations to reaction flux distribution and metabolic network reorganization resulting from water limitation. Our study provides insights into the potential metabolic strategies employed by G. dulcis , emphasizing the crucial roles of compatible solutes, metabolic water, energy conservation, and the precise regulation of reaction rates in their adaptation to water stress.
Growing evidence of the potential habitability of Ocean Worlds across our Solar System is motivating the advancement of technologies capable of detecting life as we know it – sharing a common ancestry or common physicochemical origin to life on Earth – or don’t know it, representing a distinct genesis event of life quite different than our one known example. Here, we propose the Electronic Life-detection Instrument for Enceladus/Europa (ELIE), a solid-state single-molecule instrument payload that aims to search for life based on the detection of amino acids and informational polymers (IPs) at the parts per billion to trillion level. As a first proof-of- principle in a laboratory environment, we demonstrate single-molecule detection of the amino acid L-proline at a 10 µM concentration in a compact system. Based on ELIE’s solid-state quantum electronic tunneling sensing mechanism, we further propose the quantum property of the HOMO–LUMO gap (energy difference between a molecule’s highest energy occupied molecular orbital and lowest energy unoccupied molecular orbital) as a novel approach to measure amino acid complexity. Finally, we assess the potential of ELIE to discriminate between abiotically and biotically derived (-amino acids in order to reduce false positive risk for life detection. Nanogap technology can also be applied to the detection of nucleobases and short sequences of IPs such as, but not limited to, RNA and DNA. Future missions may utilize ELIE to target preserved biosignatures on the surface of Mars, extant life in its deep subsurface, or life or its biosignatures in the plume, surface, or subsurface of ice moons such as Enceladus or Europa. One Sentence Summary: A solid-state nanogap can determine the abundance distribution of amino acids, detect nucleic acids, and shows potential for detecting life as we know it and life as we don’t.
Ice deposits on Earth provide an extended record of volcanism, planetary climate, and life. On Mars, such a record may extend as far back as tens to hundreds of millions of years (My), compared to only a few My on Earth. Here, we propose and demonstrate a compact instrument, the Melter-Sublimator for Ice Science (MSIS), and describe its potential use cases. Similar to current use in the analysis of ice cores, linking MSIS to downstream elemental, chemical, and biological analyses could address whether Mars is, or was in the recent past, volcanically active, enable the creation of a detailed climate history of the late Amazonian, and seek evidence of subsurface life preserved in ice sheets. The sublimation feature can not only serve as a preconcentrator for in-situ analyses, but also enable the collection of rare material such as cosmogenic nuclides, which could be returned to Earth and used to confirm and expand the record of nearby supernovas and long-term trends in space weather. Missions to Ocean Worlds such as Europa or Enceladus will involve ice processing, and there MSIS would deliver liquid samples for downstream wet chemistry analyses. Our combined melter-sublimator system can thus help to address diverse questions in heliophysics, habitability, and astrobiology.
An origin of Earth life on Mars would resolve significant inconsistencies between the inferred history of life and Earth's geologic history. Life as we know it utilizes amino acids, nucleic acids, and lipids for the metabolic, informational, and compartment-forming subsystems of a cell. Such building blocks may have formed simultaneously from cyanosulfidic chemical precursors in a planetary surface scenario involving ultraviolet light, wet-dry cycling, and volcanism. On the inferred water world of early Earth, such an origin would have been limited to volcanic island hotspots. A cyanosulfidic origin of life could have taken place on Mars via photoredox chemistry, facilitated by orders-of-magnitude more sub-aerial crust than early Earth, and an earlier transition to oxidative conditions that could have been involved in final fixation of the genetic code. Meteoritic bombardment may have generated transient habitable environments and ejected and transferred life to Earth. Ongoing and future missions to Mars offer an unprecedented opportunity to confirm or refute evidence consistent with a cyanosulfidic origin of life on Mars, search for evidence of ancient life, and constrain the evolution of Mars' oxidation state over time. We should seek to prove or refute a martian origin for life on Earth alongside other possibilities.
Finding evidence of extraterrestrial life would be one of the most profound scientific discoveries ever made, advancing humanity into a new epoch of cosmic awareness. The Venus Life Finder (VLF) missions feature a series of three direct atmospheric probes designed to assess the habitability of the Venusian clouds and search for signs of life and life itself. The VLF missions are an astrobiology-focused set of missions, and the first two out of three can be launched quickly and at a relatively low cost. The mission concepts come out of an 18-month study by an MIT-led worldwide consortium.
The composition, sizes and shapes of particles in the clouds of Venus have previously been studied with a variety of in situ and remote sensor measurements. A number of major questions remain unresolved, however, motivating the development of an exploratory mission that will drop a small probe, instrumented with a single-particle autofluorescence nephelometer (AFN), into Venus’s atmosphere. The AFN is specifically designed to address uncertainties associated with the asphericity and complex refractive indices of cloud particles. The AFN projects a collimated, focused, linearly polarized, 440 nm wavelength laser beam through a window of the capsule into the airstream and measures the polarized components of some of the light that is scattered by individual particles that pass through the laser beam. The AFN also measures fluorescence from those particles that contain material that fluoresce when excited at a wavelength of 440 nm and emit at 470–520 nm. Fluorescence is expected from some organic molecules if present in the particles. AFN measurements during probe passage through the Venus clouds are intended to provide constraints on particle number concentration, size, shape, and composition. Hypothesized organics, if present in Venus aerosols, may be detected by the AFN as a precursor to precise identification via future missions. The AFN has been chosen as the primary science instrument for the upcoming Rocket Lab mission to Venus, to search for organic molecules in the cloud particles and constrain the particle composition.
Venus is known for its extreme surface temperature and its sulfuric acid clouds. But the cloud layers on Venus have similar temperature and pressure conditions to those on the surface of Earth and are conjectured to be a possible habitat for microscopic life forms. We propose a mission concept to explore the clouds of Venus for up to 30 days to evaluate habitability and search for signs of life. The baseline mission targets a 2026 launch opportunity. A super-pressure variable float altitude balloon aerobot cycles between the altitudes of 48 and 60 km, i.e., primarily traversing the lower, middle, and part of the upper cloud layers. The instrument suite is carried by a gondola design derived from the Pioneer Venus Large Probe pressure vessel. The aerobot transmits data via an orbiter relay combined with a direct-to-Earth link. The orbiter is captured into a 6-h retrograde orbit with a low, roughly 170-degree, inclination. The total mass of the orbiter and entry probe is estimated to be 640 kg. An alternate concept for a constant float altitude balloon is also discussed as a lower complexity option compared to the variable float altitude version. The proposed mission would complement other planned missions and could help elucidate the limits of habitability and the role of unknown chemistry or possibly life itself in the Venus atmosphere.
Exploring how life is distributed in the universe is an extraordinary interdisciplinary challenge, but increasingly subject to testable hypotheses. Biology has emerged and flourished on at least one planet, and that renders the search for life elsewhere a scientific question. We cannot hope to travel to exoplanets in pursuit of other life even if we identify convincing biosignatures, but we do have direct access to planets and moons in our solar system. It is therefore a matter of deep astrobiological interest to study their histories and environments, whether or not they harbor life, and better understand the constraints that delimit the emergence and persistence of biology in any context. In this perspective, we argue that targeted chemistry- and biology-inspired experiments are informative to the development of instruments for space missions, and essential for interpreting the data they generate. This approach is especially useful for studying Venus because if it were an exoplanet we would categorize it as Earth-like based on its mass and orbital distance, but its atmosphere and surface are decidedly not Earth-like. Here, we present a general justification for exploring the solar system from an astrobiological perspective, even destinations that may not harbor life. We introduce the extreme environments of Venus, and argue that rigorous and observation-driven experiments can guide instrument development for imminent missions to the Venusian clouds. We highlight several specific examples, including the study of organic chemistry under extreme conditions, and harnessing the fluorescent properties of molecules to make a variety of otherwise challenging measurements.
When the Artemis missions launch, NASA's Orion spacecraft (and crew as of the Artemis II mission) will be exposed to the deep space radiation environment beyond the protection of Earth's magnetosphere. Hence, it is essential to characterize the effects of space radiation, microgravity, and the combination thereof on cells and organisms, i.e., to quantify any correlations between the deep space radiation environment, genetic variation, and induced genetic changes in cells. To address this, the Artemis I mission will include the Peristaltic Laboratory for Automated Science with Multigenerations (PLASM) hardware containing the Deep Space Radiation Genomics (DSRG) experiment. The scientific aims of DSRG are (i) to identify the metabolic and genomic pathways in yeast affected by microgravity, space radiation, and their combination, and (ii) to differentiate between gravity and radiation exposure on single-gene deletion/overexpressing strains' ability to thrive in the spaceflight environment. Yeast is used as a model system because 70% of its essential genes have a human homolog, and over half of these homologs can functionally replace their human counterpart. As part of the experiment preparation towards spaceflight, an Experiment Verification Test (EVT) was performed at the Kennedy Space Center to verify that the experiment design, hardware, and approach to automated operations will enable achieving the scientific aims. For the EVT, fluidic systems were assembled, sterilized, loaded, and acceptance-tested, and subsequently integrated with the engineering parts to produce a flight-like PLASM unit. Each fluidic system consisted of (i) a Media Bag, (ii) four Culture Bags loaded with Saccharomyces cerevisiae (two with deletion series and the remaining two with overexpression series), and (iii) tubing and check valves. The EVT PLASM unit was put under a temperature profile replicating the anticipated different phases of flight, including handover to launch, spaceflight, and splashdown to handover back to the science team, for a 58-day period. At EVT completion, the rate of activation, cellular growth, RNA integrity, and sample contamination were interrogated. All of the experiment's success criteria were satisfied, encouraging our efforts to perform this investigation on Artemis I. This manuscript thus describes the process of spaceflight experiment design maturation with a focus on the EVT, its results, DSRG's preparation for its planned launch on Artemis I in 2022, and how the PLASM hardware can enable other scientific goals on future Artemis missions and/or the Lunar Orbital Platform – Gateway.
Regular, low-cost Decadal-class science missions to planetary destinations will be enabled by high-ΔV small spacecraft, such as the high-energy Photon, and small launch vehicles, such as Electron, to support expanding opportunities for scientists and to increase the rate of science return. The Rocket Lab mission to Venus is a small direct entry probe planned for baseline launch in May 2023 with accommodation for a single ~1 kg instrument. A backup launch window is available in January 2025. The probe mission will spend about 5 min in the Venus cloud layers at 48–60 km altitude above the surface and collect in situ measurements. We have chosen a low-mass, low-cost autofluorescing nephelometer to search for organic molecules in the cloud particles and constrain the particle composition.