Diamond Lake, located in the Oregon Cascade Range, was treated with rotenone in 2006 to remove invasive populations of cyprinids, Gila bicolor and Notemigonus crysoleucas. The treatment successfully removed all fish, and the lake was restocked in 2007 with rainbow trout (Oncorhynchus mykiss). The treatment resulted in large increases in transparency, large cladocerans (Daphnia pulicaria), and benthic invertebrates. The previous cyanobacterial blooms were comprised almost exclusively of Anabaena [Dolichospermum], whereas the current populations of cyanophytes include Gloeotrichia. Cyprinids were reintroduced into the lake and documented in 2008 (Notemigonus crysoleucas) and 2015 (Gila bicolor), likely contributing to a decline of several metrics of water quality. Piscivorous trout (Salmo trutta and Salmo trutta x Salvelinus fontinalis) were introduced into the lake starting in 2016 to control the introduced cyprinids. The cyprinid populations have stabilized, and most metrics of lake status (Secchi disk transparency, phytoplankton biovolume, abundance of large cladocerans, zoobenthic biomass, trout condition factor) indicate that the lake has improved substantially since the treatment and introduction of piscivorous trout. It is unclear whether the cyprinid populations are constrained by behavioral mechanisms associated with the introduction of the piscivorous trout or whether other factors currently keep the cyprinids in check. The success of this biomanipulation project requires continued monitoring and use of adaptive management strategies to respond to changes in fish composition.

A project to mechanically remove an over-abundant population of cyprinids (Gila bicolor) was tested in a hydropower impoundment, Lemolo Lake (USA). The netting program removed 29.7 tons of fish (163 kg/ha) over a seven-year period that resulted in a reduction in the intensity and duration of cyanobacteria blooms. However, the suppression of the tui chub population apparently allowed for a residual population of kokanee (Oncorhynchus nerka) to proliferate. The resurgence of the kokanee, combined with the initiation of a rainbow trout stocking program, offset some of the gains in water quality achieved with the reduction of tui chub biomass. The dominant cyanobacterium present in Lemolo Lake transitioned to Gloeotrichia echinulata in 2013, but the majority of these colonies were apparently derived from an upstream lake. The changes in water quality from 2005–2013 were simulated for Lemolo Lake using the two-dimensional, hydrodynamic model, CE-QUAL-W2. The model reproduced many aspects of the water quality in Lemolo Lake and was used, in combination with a simple Bayesian model, to evaluate a number of potential scenarios for further improving water quality in the impoundment. Promoting a deeper drawdown of the hydroelectric impoundment during the winter to selectively increase entrainment of tui chub and kokanee, combined with continued netting targeted at tui chub, was judged to offer the greatest opportunity to manage the facility for water quality, fisheries and hydropower objectives.

The lower Deschutes River represents the 161-km reach downstream of three hydroelectric dams flowing to its confluence at the Columbia River. We examined hydrology and nutrient chemistry from 2015-2017 to 2019 to determine factors affecting periphyton community composition and abundance following a change in the outlet structure and depth of release waters from the major upstream impoundment. The periphyton community composition was abundant and diverse in 2015 and 2016 and lower in 2017 and 2019. Filamentous chlorophytes were dominant in the first 2 years but were sparse in the subsequent years. Cyanophytes were dominant in 2017 and 2019. The expectation entering the study was that altered nutrient chemistry associated with the change in operations resulted in conditions more favorable for periphyton growth. Concentrations of total and soluble phosphorous are independent of reservoir operations, being high in all years because of natural weathering of P-rich volcanic rocks in the basin. Concentrations of TN and DIN were low all study years, resulting in a system that was N-limited, but with similar chemistry among the study years. The hydrology during 2015 and 2016, with abundant chlorophytes, exhibited low flow in the spring, whereas high spring flows were observed in the latter years. We conclude that high spring flows were far more influential in affecting the periphyton community composition in the lower Deschutes River compared to nutrient chemistry.

The potential for atmospheric deposition of sulfur and nitrogen to affect lakes in the Northwestern USA to cause lake acidification was assessed by examining four lakes extending from southern Oregon into the central Washington Cascades. The four lakes were dilute (conductivity 2.2 to 3.6 μS/cm), low ANC (−3 to 11 μeq/L) systems, located in subalpine to alpine settings in designated wilderness areas. The four lakes were cored, dated with 210Pb and 14C, and analyzed for sediment nutrients and diatom remains. Diatom-inferred changes in chemistry were made possible through an earlier project to create a diatom calibration set for the Cascades. The three southern lakes exhibited volcanic inputs of ash or tephra, but diatom stratigraphy generally showed only modest responses to these events. None of the lakes exhibited any recent trends in diatom-inferred pH. The most significant finding with respect to paleolimnology was that Foehn Lake, WA, was formed in the twentieth century (1930 ± 7 years), likely as a result of melting of an adjacent snowfield. Current deposition was estimated using the AIRPACT-3 system, and lake chemistry was simulated using the CE-QUAL-W2 hydrodynamic model that had been modified to represent acid-base chemistry. The model simulations showed that the three southern lakes in the transect were insensitive to increases of nitrogen and sulfur until simulated increases reached 300% of current levels. Foehn Lake showed simulated declines of pH and ANC beginning at 50% increases over current deposition of S and N. The three southern lakes are resistant to changes from atmospheric deposition and other disturbances because of long hydraulic residence times, allowing internal processes to neutralize acidic inputs.

Lake Abert, a terminal alkaline salt lake in south central Oregon, has been a key staging area for migratory waterbirds along the Pacific Flyway. In 2014, the lake shrank to about 5% of its maximum size, and its salinity increased from 75 g.L-1 to 250 g.L-1. This resulted in a major ecosystem shift from one dominated at higher trophic levels by invertebrates and waterbirds to one composed primarily of hypersaline-adapted microbes. A large variety of halophilic bacteria and archaea were also detected using 16S rRNA metagenomic sequence analysis. The loss of prey and staging habitat for migratory waterbirds was especially pronounced for Eared Grebe, Red-necked Phalarope, and Wilson's Phalarope, all of which feed on brine shrimp and alkali flies. The last time the lake was in this state was nearly a century ago during the Dust Bowl of the 1930s, which was a once-in-500-years drought. To understand the causes of the current event, we examined hydrological, climatic, and biological data. The primary cause of the event appears to have been the combined effects of upstream water diversions and lower river flows that were exacerbated by a moderate decade-long drought and elevated evaporation rates.

In September 2006, Diamond Lake (OR, USA) was treated by the Oregon Department of Fish and Wildlife with a mixture of powdered and liquid rotenone in the successful eradication of invasive tui chub Gila bicolor. During treatment, the lake was in the middle of a phytoplankton (including cyanobacteria Anabaena sp.) bloom, resulting in an elevated pH of 9.7. Dissipation of rotenone and its major metabolite rotenolone from water, sediment, and macrophytes was monitored. Rotenone dissipated quickly from Diamond Lake water; approximately 75% was gone within 2 d, and the average half-life (t½) value, estimated by using first-order kinetics, was 4.5 d. Rotenolone persisted longer (>46 d) with a short-term t½ value of 16.2 d. Neither compound was found in groundwater, sediments, or macrophytes. The dissipation of rotenone and rotenolone appeared to occur in 2 stages, which was possibly the result of a release of both compounds from decaying phytoplankton following their initial dissipation. Fisheries managers applying rotenone for fish eradication in lentic environments should consider the following to maximize efficacy and regulatory compliance: 1) treat at a minimum of twice the minimum dose demonstrated for complete mortality of the target species and possibly higher depending on the site's water pH and algae abundance, and 2) implement a program that closely monitors rotenone concentrations in the posttreatment management of a treated water body.

Eilers JM, Truemper HA, Jackson LS, Eilers BJ, Loomis DW. 2011. Eradication of an invasive cyprinid (Gila bicolor) to achieve water quality goals in Diamond Lake, Oregon (USA). Lake Reserv Manage. 27: 194-204.We used a case study of whole-lake fish removal to demonstrate the importance of the fish community to nutrient cycling in Diamond Lake, Oregon, USA, to meet regulated water quality standards for pH, dissolved oxygen and nuisance algae. The cyprinid tui chub (Gila bicolor) was removed through a process beginning with netting and ending with a whole-lake and tributary rotenone treatment in September 2006. The lake was stocked with rainbow trout in spring 2007. Between 2007 and 2009, lake transparency increased 250%, accompanied by decreases in epilimnetic pH, total nitrogen, and total organic carbon. Mean concentrations of total phosphorus and ortho-phosphorus remained unchanged in epilimnetic waters. Chlorophyll a, phytoplankton biovolume, Anabaena biovolume, and Anabaena cell density declined. Daphnia pulicaria, a large herbivorous cladoceran virtually absent for 10 years, returned in abundance, and benthic biomass increased more than 12-fold. The project successfully demonstrated that water quality and fishery goals can be met through eradication of the invasive cyprinid. Fish populations need to be considered in some lakes to achieve water quality standards.

Freshwater harmful algal blooms (FHABs) incidence is increasing worldwide, presenting risks for human and animal health, aquatic-ecosystem sustainability and economic vitality. Increasing nutrient input to freshwater, increasing temperatures and decreasing flow rates that create quiescent or stagnant waters are primary causes of increasing incidence. Ecological approaches to FHAB control target these causes to reduce FHAB incidence without adversely impacting aquatic ecosystems. Artificial circulating increases water flow, and is reported to suppress FHABs in the literature on habitat disturbance. This report evaluates the efficacy of a new technology, solar powered circulation (SPC), designed to create long-distances circulation of the epilimnion (>200 m) to suppress FHABs. Three nutrient-enriched, source-water reservoirs periodically seeded with cyanobacteria from influent served as case studies. Utility personnel systematically and consistently collected limnological data before and during SPC deployment, thus enabling valid within-site comparisons. SPC units were deployed at densities of approximately 0.15 km2/unit. Pre- to post-SPC initiation changes in cyanobacterial density indicated that SPC strongly suppressed FHABs through a process that strengthened over time. Densities of green algae increased significantly during SPC at the only site where algaecides were never used, and zooplankton density increased significantly at another site. Diatom densities approximately doubled following SPC initiation, although the increases were not statistically significant. Copper sulfate usage declined by 85% at one site during SPC, whereas applications declined from approximately 12/year to 1–2/year at the other site where algaecides were used. SPC provided an effective approach to FHAB control that was ecologically benign and environmentally sustainable.

In 2001, a serious bloom of potentially toxic cyanobacteria (blue-green algae) developed in Diamond Lake, a popular recreational lake in the Umpqua National Forest (UNF), Oregon. Toxins produced by cyanobacteria have been implicated in human health problems ranging from skin irritation and gastrointestinal upset, to death from liver or respiratory failure. Blooms have continued at Diamond Lake since 2001 and prompted a call for action to control the problem. In the interim, a strategy was developed to deal with the public health threat posed by cyanobacteria. UNF staff, working with private and government organizations, developed a plan to monitor the lake. Results from the monitoring program were interpreted in light of the World Health Organization (WHO) guidelines for toxic cyanobacteria species. We describe this effort and offer lessons learned to other lake managers faced with similar issues.

Algal samples were analyzed from 3 lakes, Crane Prairie Reservoir and Odell Lake in Oregon and an Anonymous North East System, using both standard taxonomic criteria for identification and DNA sequencing techniques. Two toxin-producing Anabaena populations, one with consistent akinete structure and another with variable akinete structure, were investigated. Samples were characterized based on several genetic markers (nifH, cpcBA-IGS, ITS1), toxins (anatoxin-a, saxitoxin, and microcystin) and morphological variation. Taxonomy within the Nostacales is based on vegetative and terminal cell structure, filament type and aggregation, and position and structure of heterocysts and akinetes. Many taxonomists rely heavily on akinete structure for microscopic identification. Identification from material preserved with Lugol's solution is challenging due to the breakup of colonies, cell distortion, and masking of pigment color. Based on morphological variation, the Crane Prairie and Odell populations were identified as A. flos-aquae, A. circinalis, or A. lemmermannii, and toxin analysis detected the presence of microcystin. These populations were most similar to A. lemmermannii (cpcBA-IGS) or Anabaena sp. (ITS1) by DNA sequence analysis. The Anonymous North East System population was identified as A. flos-aquae, A. circinalis or A. spiroides based on morphological variation, and both microcystin and anatoxin-a were detected in these samples. Sequences most similar to A. cylindrica (nifH), A. planktonica (cpcBA-IGS), A. spiroides or Aphanizomenon flos-aquae (ITS1) were identified in the Anonymous North East System samples, but there were no definitive matches. Although molecular methods can be useful tools for confirming identification based on field material, their ability to resolve issues of taxonomic identification are dependent on the comprehensiveness of the sequence database. Taxonomic keys based on cell morphology and identification based on current DNA sequence databases are subject to similar levels of variation and uncertainty.

Biological responses to a formerly fi shless lake in the Cascade Range, Oregon (USA) were assessed through monitoring of recent changes and paleolimnological techniques to assess earlier changes. We used un- published fi sheries reports, sediment cores, and available published and unpublished water quality data to evaluate changes to the lake. Diamond Lake has undergone four periods of fiintroductions in the 20 th century. Rainbow trout (Salmo gairdneri) were annually released from 1910-2006, except for 1949 and 1954. Tui chub (Gila bicolor), an omnivorous cyprinid, were introduced in the late 1930s and the late 1980s, presumably as discarded live bait. Diamond Lake was treated with rotenone in 1954 which successfully eradicated the tui chub. The introductions of trout caused relatively modest changes in water quality and lake biota, whereas the introductions of tui chub caused major increases in cyanobacteria, changes in diatom community composition, reduction in transparency, increases in the proportion of rotifers, major reduction in benthic standing crop, and virtual elimination of amphipods, gas- tropods, and other large-bodied invertebrates. The unintended biomanipulations demonstrate the importance of an omnivorous cyprinid in promoting a series of biological responses throughout the lake food web.

The contributions of current agricultural practices to environmental degradation and the social problems facing agricultural regions are well known. However, landscape-scale alternatives to current trends have not been fully explored nor their potential impacts quantified. To address this research need, our interdisciplinary team designed three alternative future scenarios for two watersheds in Iowa, USA, and used spatially-explicit models to evaluate the potential consequences of changes in farmland management. This paper summarizes and integrates the results of this interdisciplinary research project into an assessment of the designed alternatives intended to improve our understanding of landscape ecology in agricultural ecosystems and to inform agricultural policy. Scenario futures were digitized into a Geographic Information System (GIS), visualized with maps and simulated images, and evaluated for multiple endpoints to assess impacts of land use change on water quality, social and economic goals, and native flora and fauna. The Biodiversity scenario, targeting restoration of indigenous biodiversity, ranked higher than the current landscape for all endpoints (biodiversity, water quality, farmer preference, and profitability). The Biodiversity scenario ranked higher than the Production scenario (which focused on profitable agricultural production) in all endpoints but profitability, for which the two scenarios scored similarly, and also ranked higher than the Water Quality scenario in all endpoints except water quality. The Water Quality scenario, which targeted improvement in water quality, ranked highest of all landscapes in potential water quality and higher than the current landscape and the Production scenario in all but profitability. Our results indicate that innovative agricultural practices targeting environmental improvements may be acceptable to farmers and could substantially reduce the environmental impacts of agriculture in this region.

Sediment cores were collected from Upper Klamath Lake in October, 1998 and analyzed for 210Pb, 14C, 15N, N, P, C, Ti, Al, diatoms, Pediastrum, and cyanobacterial akinetes. These results were used to reconstruct changes in water quality in Upper Klamath Lake over the last 150 years. The results showed that there was substantial mixing of the upper 10 cm of sediment, representing the previous 20 to 30 years. However, below that, 210Pb activity declined monotonically, allowing reasonable dating for the period from about 1850 to 1970. The sediment accumulation rates (SAR) showed a substantial increase in the 20th century. The increase in SAR corresponded with increases in erosional input from the watershed as represented by the increases in sediment concentrations of Ti and Al. The upper 20 cm of sediment, representing the last 150 years, also showed increases in C, N, P, and 15N. The increases in nutrient concentrations may be affected to various degrees by diagenetic reactions within the sediments, although the changes in concentrations also were marked by changes in the N:P ratio and in a qualitative change in the source of N as reflected in increasing δ15N. The diatoms showed modest changes in the 20th century, with increases in Asterionella formosa, Stephanodiscus hantzschii, and S. parvus. Pediastrum, a green alga, was well-preserved in the sediments and exhibited a sharp decline in relative abundance in the upper sediments. Total cyanobacteria, as represented by preserved akinetes, exhibited only minor changes in the last 1000 years. However, Aphanizomenon flos-aquae, a taxon which was formerly not present in the lake 150 years ago, but that now dominates the summer phytoplankton, has shown major increases over the past 100 years. The changes in sediment composition are consistent with activities including timber harvest, drainage of wetlands, and agricultural activities associated with livestock grazing, irrigated cropland, and hydrologic modifications.