We thank Manning (1) for his detailed consideration of our published work but point out that none of the objections raised affects, undermines, or alters our core scientific conclusions. First, the wiggle-match position using IntCal13 was undertaken to demonstrate comparability with previously published results, not to date our annual 14C sequence. Any calibrated result is subject to change if new data are added or if new iterations of the calibration curve (2) or OxCal (3) are used (as evidenced by repeated redating of parts of the Anatolian sequence [Manning et al. (refs. 4⇓–6)]). Second, where our contribution presents something different, (i.e., a temporal anchor for … [↵][1]1To whom correspondence may be addressed. Email: c.pearson{at}ltrr.arizona.edu. [1]: #xref-corresp-1-1
ABSTRACTIn 2018 Pearson et al. published a new sequence of annual radiocarbon (14C) data derived from oak (Quercus sp.) trees from Northern Ireland and bristlecone pine (Pinus longaeva) from North America across the period 1700–1500 BC. The study indicated that the more highly resolved shape of an annually based calibration dataset could improve the accuracy of 14C calibration during this period. This finding had implications for the controversial dating of the eruption of Thera in the Eastern Mediterranean. To test for interlaboratory variation and improve the robustness of the annual dataset for calibration purposes, we have generated a replicate sequence from the same Irish oaks at ETH Zürich. These data are compatible with the Irish oak 14C dataset previously produced at the University of Arizona and are used (along with additional data) to examine inter-tree and interlaboratory variation in multiyear annual 14C time-series. The results raise questions about regional 14C offsets at different scales and demonstrate the potential of annually resolved 14C for refining subdecadal and larger scale features for calibration, solar reconstruction, and multiproxy synchronization.
Significance This study demonstrates how different lines of evidence from tree rings in widely spread growth locations can combine to fix an approximately dated tree-ring record from the East Mediterranean Bronze–Iron Age to an exact calendar-dated range. This tree-ring record is of high importance for regional chronology and spans the time period in which the major volcanic eruption of Thera (Santorini) occurred. Exact dating of this eruption is important because it provides a prominent marker horizon through which ancient timelines of the East Mediterranean, Egypt, and the Levant can be synchronized. Chemical analysis of the dated tree-ring sequence identifies a chemical change in their growth environment around 1560 BC, which while requiring further substantiation, may be evidence of the Thera eruption.
The progress of science is tied to the standardization of measurements, instruments, and data. This is especially true in the Big Data age, where analyzing large data volumes critically hinges on the data being standardized. Accordingly, the lack of community-sanctioned data standards in paleoclimatology has largely precluded the benefits of Big Data advances in the field. Building upon recent efforts to standardize the format and terminology of paleoclimate data, this article describes the Paleoclimate Community reporTing Standard (PaCTS), a crowdsourced reporting standard for such data. PaCTS captures which information should be included when reporting paleoclimate data, with the goal of maximizing the reuse value of paleoclimate data sets, particularly for synthesis work and comparison to climate model simulations. Initiated by the LinkedEarth project, the process to elicit a reporting standard involved an international workshop in 2016, various forms of digital community engagement over the next few years, and grassroots working groups. Participants in this process identified important properties across paleoclimate archives, in addition to the reporting of uncertainties and chronologies; they also identified archive-specific properties and distinguished reporting standards for new versus legacy data sets. This work shows that at least 135 respondents overwhelmingly support a drastic increase in the amount of metadata accompanying paleoclimate data sets. Since such goals are at odds with present practices, we discuss a transparent path toward implementing or revising these recommendations in the near future, using both bottom-up and top-down approaches.
The mid-second millennium BCE eruption of Thera (Santorini) offers a critically important marker horizon to synchronize archaeological chronologies of the Aegean, Egypt, and the Near East and to anchor paleoenvironmental records from ice cores, speleothems, and lake sediments. Precise and accurate dating for the event has been the subject of many decades of research. Using calendar-dated tree rings, we created an annual resolution radiocarbon time series 1700-1500 BCE to validate, improve, or more clearly define the limitations for radiocarbon calibration of materials from key eruption contexts. Results show an offset from the international radiocarbon calibration curve, which indicates a shift in the calibrated age range for Thera toward the 16th century BCE. This finding sheds new light on the long-running debate focused on a discrepancy between radiocarbon (late 17th-early 16th century BCE) and archaeological (mid 16th-early 15th century BCE) dating evidence for Thera.
A wide variety of information or ‘metadata’ is required when undertaking dendrochronological sampling. Traditionally, researchers record observations and measurements on field notebooks and/or paper recording forms, and use digital cameras and hand-held GPS devices to capture images and record locations. In the lab, field notes are often manually entered into spreadsheets or personal databases, which are then sometimes linked to images and GPS waypoints. This process is both time consuming and prone to human and instrument error. Specialised hardware technology exists to marry these data sources, but costs can be prohibitive for small scale operations (>$2000USD). Such systems often include proprietary software that is tailored to very specific needs and might require a high level of expertise to use. We report on the successful testing and deployment of a dendrochronological field data collection system utilising affordable off-the-shelf devices ($100–300USD). The method builds upon established open source software that has been widely used in developing countries for public health projects as well as to assist in disaster recovery operations. It includes customisable forms for digital data entry in the field, and a marrying of accurate GPS location with geotagged photographs (with possible extensions to other measuring devices via Bluetooth) into structured data fields that are easy to learn and operate. Digital data collection is less prone to human error and efficiently captures a range of important metadata. In our experience, the hardware proved field worthy in terms of size, ruggedness, and dependability (e.g., battery life). The system integrates directly with the Tellervo software to both create forms and populate the database, providing end users with the ability to tailor the solution to their particular field data collection needs.
The Tellervo dendrochronological software builds upon the Tree-Ring Data Standard (TRiDaS) to provide a tool for recording and managing all manner of dendrochronological data. However, Tellervo is especially useful for dendroarchaeological research. The traditional file formats used in dendrochronology—and by association the applications that use them—have very limited and nonstandard methods for recording rich information about dendro samples and their context. Such information is especially important in dendroarchaeological research to ensure accurate conclusions are made. Tellervo is described here in the context of research carried out as part of the excavations of the Theodosian Harbor at Yenikapı, Istanbul.
Existing on-line databases for dendrochronology are not flexible in terms of user permissions, tree-ring data formats, metadata administration and language. This is why we developed the Digital Collaboratory for Cultural Dendrochronology (DCCD). This TRiDaS-based multi-lingual database allows users to control data access, to perform queries, to upload and download (meta)data in a variety of digital formats, and to edit metadata on line. The content of the DCCD conforms to EU best practices regarding the long-term preservation of digital research data.
The 1st millennium AD was a time of great transition in Europe and the Mediterranean. At the heart of the Byzantine Empire, Constantinople (modern day Istanbul) was a pivotal trade hub for the Aegean region. Establishing a precise and accurate dating framework for the development of this remarkable city and a chronological reference for this critical time period for the Mediterranean region is of great importance to a wide range of scholars. Here we present a new 213 year tree-ring record from 89 oak samples placed in time by dendrochronology and supported by radiocarbon analysis and historical documentation. It represents the middle of the first millennium AD in Constantinople. The tree-ring series are derived from pilings recovered from the extraordinary excavations of the so-called “Theodosian harbor” at Yenikapı, Istanbul, along with timbers from other sites and buildings around the city, including one of the most famous sites on the Istanbul sky-line—Hagia Sophia. They provide potential for new insight into a time period in which earthquakes, the Justinianic plague, and even a possible tsunami struck the city, and during which dramatic changes in climate have been recorded in other paleoenvironmental proxies. The chronology is the first published tree-ring series from the Aegean region to cover the ‘event’ years of AD 536–7 and 542 which are characterized by anomalous growth in other tree-ring series from around the world, but interestingly these event years are not evident in this tree-ring sequence.
Dendrochronological data formats in general offer limited space for recording associated metadata. Such information is often recorded separately from the actual time series, and often only on paper. TRiDaBASE has been developed to improve metadata administration. It is a relational Microsoft Access database that allows users to register digital metadata according to TRiDaS, to generate TRiDaS XML for uploading to TRiDaS-based analytical systems and repositories, and to ingest TRiDaS XML created elsewhere for local querying and analyses.
There are at least 21 dendro-data formats used in dendrochronology laboratories around the world. Many of these formats are read by a limited number of programs, thereby inhibiting collaboration, limiting critical review of analyses, and risking the long-term accessibility of datasets. Some of the older formats are supported by a single program and are falling into disuse, opening the risk for data to become obsolete and unreadable. These formats also have a variety of flaws, including but not limited to no accurate method for denoting measuring units, little or no metadata support, lack of support for variables other than whole ring widths (e.g. earlywood/latewood widths, ratios and density). The proposed long-term solution is the adoption of a universal data standard such as the Tree-Ring Data Standard (TRiDaS). In the short and medium term, however, a tool is required that is capable of converting not only back and forth to this standard, but between any of the existing formats in use today. Such a tool is also required to provide continued access to data archived in obscure formats. This paper describes TRiCYCLE, a new application that does just this. TRiCYCLE is an open-source, cross-platform, desktop application for the conversion of the most commonly used data formats. Two open source Java libraries upon which TRiCYCLE depends are also described. These libraries can be used by developers to implement support for all data formats within their own applications.
There are at least 21 dendro-data formats used in dendrochronology laboratories around the world. Many of these formats are read by a limited number of programs, thereby inhibiting collaboration, limiting critical review of analyses, and risking the long-term accessibility of datasets. Some of the older formats are supported by a single program and are falling into disuse, opening the risk for data to become obsolete and unreadable. These formats also have a variety of flaws, including but not limited to no accurate method for denoting measuring units, little or no metadata support, lack of support for variables other than whole ring widths (e.g. earlywood/latewood widths, ratios and density). The proposed long-term solution is the adoption of a universal data standard such as the Tree-Ring Data Standard (TRiDaS). In the short and medium term, however, a tool is required that is capable of converting not only back and forth to this standard, but between any of the existing formats in use today. Such a tool is also required to provide continued access to data archived in obscure formats. This paper describes TRiCYCLE, a new application that does just this. TRiCYCLE is an open-source, cross-platform, desktop application for the conversion of the most commonly used data formats. Two open source Java libraries upon which TRiCYCLE depends are also described. These libraries can be used by developers to implement support for all data formats within their own applications.
ABSTRACTThis paper examines the landscape context of the Bartlow Hills, a group of large Romano-British barrows that were excavated in the 1840s but have been largely neglected since. GIS is employed to test whether it was possible to view the mounds from nearby roads, barrows, and villas. Existing research on provincial barrows, and especially their landscape context, and some recent relevant applications of GIS are reviewed. We argue that barrows are active and symbolically charged statements about power and identity. The most striking pattern to emerge from the GIS analysis is a focus on display to a local rather than a transient audience.
Species' potential distribution modelling is the process of building a representation of the fundamental ecological requirements for a species and extrapolating these requirements into a geographical region. The importance of being able to predict the distribution of species is currently highlighted by issues like global climate change, public health problems caused by disease vectors, anthropogenic impacts that can lead to massive species extinction, among other challenges. There are several computational approaches that can be used to generate potential distribution models, each achieving optimal results under different conditions. However, the existing software packages available for this purpose typically implement a single algorithm, and each software package presents a new learning curve to the user. Whenever new software is developed for species' potential distribution modelling, significant duplication of effort results because many feature requirements are shared between the different packages. Additionally, data preparation and comparison between algorithms becomes difficult when using separate software applications, since each application has different data input and output capabilities. This paper describes a generic approach for building a single computing framework capable of handling different data formats and multiple algorithms that can be used in potential distribution modelling. The ideas described in this paper have been implemented in a free and open source software package called openModeller. The main concepts of species' potential distribution modelling are also explained and an example use case illustrates potential distribution maps generated by the framework.
Tree-ring research and collaboration are currently being hampered by the lack of a suitable data-transfer standard for both data and metadata. This paper highlights the issues currently being faced and proposes a solution that, if adopted by the global dendro community, will open up the possibility of exciting new research collaborations. The solution consists of a data model for dendrochronological data and metadata, and an eXtensible Markup Language (XML) schema as a technical vehicle to exchange this data and metadata. The technology and structure of the standard enable future versions to be developed that will satisfy evolving requirements whilst remaining backwards compatible.
Synchrotron Radiation Scanning X‐Ray Fluorescence Microscopy (SXFM) was used for the first spatially/temporally resolved investigation of the multielemental chemistry of bristlecone pine (Pinus longaeva D.K. Bailey). A new protocol was designed to apply this nondestructive method of analysis to this unique palaeoclimatological resource, extracting previously inaccessible dendrochemical information at subannual resolution from tree rings ranging from 1400 to 40 μm. The potential of Pinus longaeva was assessed for the reconstruction of multicentennial annual resolution sequences of elemental change, with specific focus on the identification of multielemental markers for major, climatically effective volcanic eruptions. Increases in calcium (Ca), strontium (Sr), manganese (Mn), and zinc (Zn) were identified in association with frost rings around AD1601, following the eruption of Huaynaputina, Peru, but these could not be directly attributed to volcanogenic changes in environmental chemistry. Elemental patterns for 500 years from five trees demonstrated little agreement indicating that, for the elements detected, this species may be unsuitable for temporal reconstructions of external chemistry. Further development of SXFM dendrochemical technique, however, offers much potential for future work.
Andrew C. Jones合作论文数School of Computer Science at University of Wales, Cardiff6