Insecticide resistance is a global challenge in agriculture and public health, with the microbiome increasingly recognized as a key contributor. This review synthesizes current research on the microbiome’s roles in insecticide resistance, emphasizing mechanisms like microbe-mediated insecticide detoxification, bioactivation, and modulation of host gene expression and physiology. We also explore how different environmental factors impact microbe–host interactions and the roles of epigenetics and post-transcriptional regulation in linking microbial effects to resistance. Integrating evidence from various insect species, this review also proposes strategies for resistance management, including genetically engineered microbes to detoxify insecticides and microbial diagnostic tools for monitoring resistance markers.

Phosphorus (P) is a macronutrient that plants need to grow. However, most of the soil’s phosphorus is still insoluble, making it difficult for plants to absorb. This creates a barrier to ecologically responsible farming methods and calls for innovative approaches to phosphorus solubilization. Solublizing microorganisms improve the availability of phosphorous in soil. The term “phosphorus-solubilizing microorganisms” (PSMs) describes various fungi or bacteria that divide the phosphorus into more soluble forms. It shows how PSMs interact with plants and their processes to solubilize phosphorus. Soil pH, temperature, and nutrient availability are only a few parameters affecting its activity. PSMs are investigated for their potential to increase plant phosphorus absorption and use, thereby boosting agricultural yield and nutrient usage efficiency. The use of PSMs and their effects on the environment are also evaluated. By using PSMs, farmers may use less chemical phosphorus fertilizers that contribute to runoff and eutrophication in waterways. Furthermore, PSMs may improve soil structure, decrease nutrient losses, and increase nutrient cycling, all of which contribute to soil health and the long-term viability of agricultural systems. Phosphorus-solubilizing microorganisms have enormous promise in environmentally responsible farming and land management. Better phosphorus availability, greater agricultural output, less pollution, and better soil health are all possible outcomes of using PSMs. However, further study is required to determine the best application strategies, formulations, and choices of PSMs for various soil and plant systems. Incorporating PSMs into agricultural operations can potentially improve environmental sustainability and resilience. This article will explore the potential of PSMs in addressing critical environmental challenges, including soil erosion, nutrient runoff, sustainable farming practices, and resource conservation. Graphical Abstract

The issue of antibiotic resistance in pathogenic microbes is a global concern. This study was aimed to explore in silico and in vitro analysis of the antibacterial efficacy of different natural ligands against bacterial activity. The ligands included in the study were Propolis Neoflavanoide 1, Carvacrol, Cinnamaldehyde, Thymol, p-benzoquinone, and Ciprofloxacin (standard drug S*). The outcomes of molecular docking revealed that Propolis Neoflavaniode-1 showed a highly significant binding energy of - 7.1 and - 7.2 kcal/mol for the two gram-positive bacteria, as compared to the gram-negative bacteria. All ligands demonstrated acute toxicity (oral, dermal), except for Propolis Neoflavanoide 1 and S* drugs, with a confidence score range of 50-60%. Using a molecular dynamic simulation approach, we investigated Propolis Neoflavaniode-1's potential for therapeutic use in more detail. An MD simulation lasting 100 ns was performed using the Desmond Simulation software to examine the conformational stability and steady state of Propolis Neoflavaniode-1 in protein molecule complexes. Additionally, in vitro studies confirmed the antimicrobial activity of Propolis Neoflavaniode 1 by increasing the zone of inhibition against Gram-positive bacteria, p < 0.005 as compared to gram-negative bacteria. This study revealed the promising antibacterial efficacy of Propolis Neoflavaniode 1, demonstrated through robust in silico analyses, minimal toxicity, and confirmed in vitro antimicrobial activity, suggesting its potential as a viable alternative to combat antibiotic resistance.

A new approach to supplying foods and feeds that are high in protein has emerged in the form of insect farming. Insect-farmed food may also serve as part of a sustainable diet for humans. The mealworm Tenebrio molitor L. (Coleoptera: Tenebrionidae) is the most widely consumed insect worldwide. In this study, 10 larval diets were tested in the laboratory to determine their suitability for mass-feeding mealworms at 28 degrees C and 60-65% r.h., in a completely randomized design. Various larval diets had a significant impact on the biological features of T. molitor. The larvae, pupae, and adults were greater on diets containing wheat bran alone and wheat bran in combination with maize and porridge. Larval mortality was significantly higher (60.7%) on a diet with porridge alone, compared to a control diet, followed by diets with porridge in combination with barley (55.6%) or maize (50.6%). Sex ratio was also affected by the tested larval diets. Female hatch (65%) was higher than male hatch (35%) on diet containing wheat bran alone as compared to all other diets. The findings contribute to optimizing mealworm rearing practices for sustainable food production and promote the potential use of mealworms as a viable protein source - especially livestock diets based on mealworm reared on wheat bran show promise.

Ribosome-inactivating proteins (RIPs) are highly active N-glycosidases that depurinate both bacterial and eukaryotic rRNAs, halting protein synthesis during translation. Found in a diverse spectrum of plant species and tissues, RIPs possess antifungal, antibacterial, antiviral, and insecticidal properties linked to plant defense. In this study, we investigated the physiochemical properties of RIP peptides from the Cucurbitaceae family through bioinformatics approaches. Molecular weight, isoelectric point, aliphatic index, extinction coefficient, and secondary structures were analyzed, revealing their hydrophobic nature. The novelty of this work lies in the comprehensive examination of RIPs from the Cucurbitaceae family and their potential therapeutic applications. The study also elucidated the binding interactions of Cucurbitaceae RIPs with key biological targets, including Interleukin-6 (IL-6). Strong hydrogen bond interactions between RIPs and these targets suggest potential for innovative insilico drug design and therapeutic applications, particularly in cancer treatment. Comprehensive analysis of bond lengths using Ligpolt + software provides insights for optimizing molecular interactions, offering a valuable tool for drug design and structural biology studies.

Lumpy skin disease virus (LSDV) belongs to Poxviridae family. This virus possesses various proteins which impart potential functions to it including assembly of newly synthesized viruses in the replication cycle and forming their structure. LSDV132 protein is also one of such proteins. Its key characteristics were unknown because, no any relevant study was reported about it. This study aimed to investigate its characteristic features and essential functions using several bioinformatics techniques. These analyses included physiochemical characterization and exploring the crucial functional and structural perspectives. Upon analysis of the physiochemical properties, the instability index was computed to be 30.89% which proposed LSDV132 protein to be a stable protein. Afterwards, the phosphorylation sites were explored. Several sites were found in this regard which led to the hypothesis that it might be involved in the regulation of apoptosis and cell signaling, among other cellular processes. Furthermore, the KEGG analysis and the analysis of protein family classification confirmed that the LSDV132 protein possessed Poxvirus-BCL-2-like motifs, indicating that it might be responsible in modulating the apoptosis of host cells. This crucial finding suggested that the protein under study possessed BCL-2-like features. Proceeding this very important finding, the molecular docking analysis was performed. In this context, various viral BCL-2 inhibitors were retrieved from the ChEMBL database for docking purpose. The docking results revealed that pelcitoclax exhibited best docking scores i.e., −9.1841 kcal/mol, among all of the other docked complexes. This fact signified that this compound might serve as an inhibitor of LSDV132 protein.

Background: The ongoing global pandemic of coronavirus disease 2019 (COVID-19) caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) necessitates urgent solutions. Despite extensive clinical investigations and trials, no approved treatment has been found. To address this critical need, we designed a study to create and validate a subunit vaccine against SARS-CoV-2 based on cytotoxic T-lymphocyte (CTL) epitopes, using various immunoinformatics tools to gain essential insights into the associated immune responses.Methods: We focused on the spike region of SARS-CoV-2, vital for its survival and virulence, to identify potential antigenic CTL epitopes. Our predictions suggested that these epitopes could significantly stimulate cell-mediated immunity. We selected a sequence comprising three antigenic and nontoxic CTL epitopes to enhance the safety and immunogenicity of the final vaccine. We predicted the three-dimensional (3D) structure of the vaccine and conducted docking studies with human major histocompatibility complex 1 (MHC-1) and toll-like receptor-3 (TLR-3) receptors. Molecular dynamics (MD) simulations were performed to confirm the stability of the vaccine binding with these receptors. Additionally, in-silico Polymerase Chain Reaction (PCR) and cloning were conducted to evaluate the amplification and protein expression of the final vaccine.Results: Molecular docking studies showed strong binding between the vaccine construct and the human leukocyte antigen (HLA)-A heavy alpha chain of MHC-1 and the C-terminal domain of TLR-3 receptors. MD simulations in an explicit system further confirmed the robust and stable binding of CTL epitopes with MHC-1 and TLR-3 receptors. Using computational cloning based on SnapGene, excellent protein expression was achieved in the pET-28b(+) plasmid. Conclusions: The findings of this study strongly support the manufacturing and in vitro and in vivo investigations of this vaccine to evaluate its effectiveness as a therapy for COVID-19.

Background: Recently, Langya henipavirus (LayV), an animal virus, was found in humans in Eastern China. The single-stranded, negatively oriented RNA genome of the LayV virus from the Henipavirus genus is a member of the Paramyxoviridae family. Methods: The LayV genome analysis showed that the virus is closely related to the Mojiang henipavirus. The whole protein sequence of the glycoprotein G of the Langya henipavirus UUV47241.1 was retrieved. These proteins were further examined to predict epitopes and were found to be remarkably non-toxic, immunogenic, antigenic, and non-allergic. Results: These sequences allowed the extraction of T-cell (major histocompatibility complex class 1 and class 2) and B-cell epitopes which yielded vaccine constructs, then further examined the population coverage to determine their global acceptability. Major histocompatibility complex (MHC)-1 and MHC-2 had population coverage of 69.47% and 45.33%, respectively. The structural prediction was validated using physicochemical, molecular, and immunological features to develop a durable and efficient vaccine candidate. Conclusion: This method could make computational vaccines an effective option against dangerous microbes because they successfully cover a huge population. These results could ultimately help vaccine researchers to create a highly effective peptidebased vaccine.

Lead (Pb) is a non-essential metal with high toxicity, is persistent, is not biodegradable, and has no known biological function. It is responsible for severe health and environmental issues that need appropriate remediation. Therefore, microbes have thrived in a lead-contaminated environment without exhibiting any negative impacts. The present study aimed to examine the toxic effects of lead on animals and the isolation, identification, and characterization of lead-resistant bacterial strains and their biodegradation potential. After oral administration of lead for 4 weeks, mice showed an elevated level of leukocytes and a decrease in TEC, Hb, PCV, MCV, MCH, and MCHC levels. However, a decline in body weight and inflammation and oxidative stress was observed in liver tissues. To remediate toxic heavy metal, lead-resistant bacterial strains were isolated, among which Enterobacter exhibited maximum degradation potential at high lead concentrations. It was identified by molecular basis and after 16S rRNA sequencing, and 99% resemblance was observed with Enterobacter cloacae . FT-IR analysis of the bacteria illustrated the presence of functional groups, including hydroxyl, carboxyl group, sulfide, and amino groups, on the bacterial cell surface involved in the adsorption of lead. Moreover, electron microscopy (SEM) revealed the morphological and physiochemical changes in the bacterial cell after biosorption, indicating the interaction of Cu ions with functional groups. To summarize, the findings show the highly toxic effects of lead on animals and humans and its effective biodegradation by the bacterial strains in the lead-contaminated environment. This biological strategy can be an ideal alternative to remediate heavy metals from contaminated sites to clean up the environment.

Background: Stored wheat grains are infested by several insect pests which lead to notable financial losses, compromised food security, and higher wastage. The confused flour beetle [Tribolium confusum DuVal (Coleoptera: Tenebrionidae)] is a widespread pest infesting stored flour and grains. Pest management in stored wheat requires ecofriendly option with lower toxicity to stored grains. Diatomaceous earths (DEs) are considered environment-friendly, green insecticides and often used to manage stored product pests.Methods: This study determined the impacts of different temperatures, relative humidity levels, and doses on the efficacy of three DEs [i.e., two raw native (Ankara, and Aydin), and one commercial (Silico-Sec)]. Two temperatures (25 degrees C and 30 degrees C), two relative humidity levels (40% and 60%) and five doses (0, 250, 500, 750 and 1000 ppm) of the tested DEs were included in the study. Different DE doses were mixed with 500 g of wheat grains in plastic containers and 30 adults of T. confusum were released. The containers were kept under different temperature and relative humidity levels according to the treatments and mortality data was recorded at 7, 14 and 21 days after treatments (DAT).Results: The mortality linearly increased with increasing time intervals and DEs doses. The highest and the lowest mortality was noted at 21 and 7 DAT, respectively. All DEs caused higher mortality under 30 degrees C temperature, 40% relative humidity and 1000 ppm dose. The native DE Aydin and commercial DE Silico-Sec caused comparable mortalities.Conclusion: Overall, the highest mortality was recorded with 1000 ppm dose of all DEs under 30 degrees C temperature and 40% relative humidity. Therefore, the DEs must be applied at these environmental conditions for getting higher efficacy. Furthermore, the native DE Aydin could be utilized to manage T. confusum in the granaries. The farmer granaries in the region have similar temperature and relative humidity conditions; therefore, the DEs can be successfully used to lower the damages caused by T. confusum at farmers' level.(c) 2023 The Author(s). Published by Elsevier B.V. on behalf of King Saud University. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).

Insect herbivores have a wide range of life cycles and feeding habits, making them extremely diverse. With their host plants, they form close relationships and suppress their defense mecha-nisms. Molecular elicitors are the key bio-elements in detection and recognition of attacking enemies in tissue consumption. Insect oral secretion, frass, and fluid of egg deposition contain bio-logical active molecules called herbivore-associated elicitors (HAEs) are recognized by pattern recognition receptors (PRRs). However, in insect herbivores, little is known about the molecular basis of signal transduction and regulation of plant resistance. Many plants distinguish insect feeding from wounding by HAEs presenting in their oral secretions (OS) and induce local and systemic responses against arthropod feeding. PRRs perceive HAEs in the oral secretion of cater-pillars in a species-specific manner to elicit exclusive defense responses. HAEs-PRRs interactions induce plant resistance by reprogramming plant metabolism and transcriptional machinery. Quantitative, timely, and coordinated plant response initiate early signalling events including Ca+2, reactive oxygen species (ROS) and mitogen-activated protein kinases (MAPKs). We have discussed how early signalling cascades converge into the accumulation of phytohormones that regulate down-stream special metabolites against herbivores. In this review, we have drawn a hypothetical model of PPRs-HAEs mediated induced responses in plants and discussed how PRRs-HAEs interactions based on molecular mechanism that elicit short- and long-term induced defenses in plants. The identification of plant target insect herbivore PRRs-HAEs interactions will help to explore the fundamental molecular mechanisms of host manipulation and may generate prospects to develop novel pest resistance strategies.

Insect herbivores have a variety of life cycles and feeding habits, making them extremely diverse. With their host plants, they form close relationships and suppress their defense mechanisms. Molecular elicitors are the key bio-elements in the detection and recognition of attacking enemies in tissue consumption. Insect oral secretion, frass, and fluid of egg deposition contain biologically active molecules called herbivore-associated elicitors (HAEs) that are recognized by pattern-recognition receptors (PRRs). Many plants distinguish insect feeding from wounding by HAEs present in their oral secretions (OS) and induce local and/or systemic responses against arthropod feeding. PRRs perceive HAEs in the oral secretion of caterpillars in a species-specific manner to elicit exclusive defense responses. HAEs-PRRs interactions induce plant resistance by reprogramming plant metabolism and transcriptional machinery. Quantitative, timely, and coordinated plant response initiate early signaling events, including Ca2+, reactive oxygen species (ROS), and mitogen-activated protein kinases (MAPKs). However, in insect herbivory, little is known about the molecular basis of signal transduction and regulation of plant resistance. We discuss here how early signaling cascades converge into the accumulation of phytohormones that regulate downstream special metabolites against herbivores. In this review, we propose a hypothetical model of PPRs-HAEs-mediated-induced responses in plants and discuss how PRRs-HAEs interactions elicit short- and long-term induced defenses in plants. The understanding of PRRs-HAEs interactions will help to explore the fundamental molecular mechanisms of host manipulation and may generate prospects to develop novel pest-resistance strategies.

The fall armyworm (Spodoptera frugiperda) is a devastating invasive insect herbivore. Its success on its preferred host plant, maize (Zea mays), is supported by numerous specialized detoxification mechanisms that suppress the defense responses of maize. In this study, we used a resistant Chinese maize cultivar, Xi502, which showed slower growth and lower yield-related phenotypes compare with maize inbred line B73. Comparative transcriptomic analyses demonstrated that B73-fed fall armyworm larvae have a significantly faster transcriptomic re-configuration toward maturation compared to their siblings fed with Xi502 leaves, whereas a number of putative aromatic breakdown -related DEGs were specifically induced when feeding on Xi502. Targeted metabolomic quantification demonstrated that Xi502 contains significantly higher levels of various benzoxazinoid compounds. Artificial feeding with the structural analog of a benzoxazinoid compound preferentially accumulated in Xi502 demonstrated a significant growth inhibition effect on FAW larvae. These results provide important genetic material and preliminary evidence for further dissection of the FAW-resistance mechanism in maize.

SummaryFall armyworm (Spodoptera frugiperda) is an invasive lepidopteran pest with strong feeding preference towards maize (Zea mays). Its success on maize is facilitated by a suite of specialized detoxification and manipulation mechanisms that curtail host plant defense responses.In this study, we identified a Chinese maize inbred line Xi502 that was able to mount effective defense in response to fall armyworm attack. Comparative transcriptomics analyses, phytohormonal measurements, and targeted benzoxazinoid quantification consistently demonstrate significant inducible defense responses in Xi502, but not in the susceptible reference inbred line B73.In 24 hours, fall armyworm larvae feeding on B73 showed accelerated maturation-oriented transcriptomic responses and more changes in detoxification gene expression compared to their Xi502-fed sibling. Interestingly, oral secretions collected from larvae fed on B73 and Xi502 leaves demonstrated distinct elicitation activity when applied on either host genotypes, suggesting that variation in both insect oral secretion composition and host plant alleles could influence plant defense response.These results revealed host plant adaptation towards counter-defense mechanisms in a specialist insect herbivore, adding yet another layer to the evolutionary arms race between maize and fall armyworm. This could facilitate future investigation into the molecular mechanisms in this globally important crop-pest interaction system.

Biotic and abiotic cues can trigger priming in plants, which enables plants to respond to subsequent challenge with stronger and/or faster responses. It is well known that herbivory activates defense-related responses in systemic leaves. However, little is known about whether insect feeding activates priming in systemic leaves. To determine whether and how herbivory induces priming in maize systemic leaves, a combination of insect bioassays, phytohormone and defense metabolite quantification, and genetic and transcriptome analyses were performed. Actual and simulated Mythimna separata herbivory in maize local leaves primed the systemic leaves for enhanced accumulation of jasmonic acid and benzoxazinoids and increased resistance to M. separata. Activation of priming in maize systemic leaves depends on both the duration of simulated herbivory and perception of M. separata oral secretions in the local leaves, and genetic analysis indicated that jasmonic acid and benzoxazinoids mediate the primed defenses in systemic leaves. Consistently, in response to simulated herbivory, the primed systemic leaves exhibited a large number of genes that were uniquely regulated or showed further up- or down-regulation compared with the non-primed systemic leaves. This study provides new insight into the regulation and ecological function of priming in maize.

Maize ( Zea mays) is a staple cereal crop cultivated all over the world but that is threatened by various insects. Feeding of the lepidopteran insect Mythimna separata triggers defence signalling and increases anti-herbivore benzoxazinoids (Bxs) in the insect-damaged maize leaves. However, the herbivory-elicited within-leaf and leaf-to-leaf systemic signalling in maize remains largely unexplored. Here, we show that simulated M. separata herbivory and mechanical wounding elicited increased levels of jasmonic acid (JA), JA-Ile (JA-isoleucine conjugate) and Bxs in the damaged areas and in specific systemic regions within a leaf. Importantly, increased contents of Bxs were detected in a systemic leaf, and consistently, this leaf exhibited increased defence against M. separata. Increased JA/JA-Ile and altered transcriptome, including Bx biosynthesis genes, were detected in systemic leaves after wounding or simulated herbivory treatments, although only simulated herbivory induced increase of the contents of Bxs systemically. Promoter and co-expression analysis revealed that transcription factors bHLH57 and WRKY34 may regulate Bx biosynthesis genes in systemic leaves. Moreover, leaf ablation experiment indicated that the systemic signal rapidly exited the local leaves within 30 min after elicitation. This study provides new insight into the temporal and spatial regulation of defence responses of maize against lepidopteran insects. This article is part of the theme issue 'Biotic signalling sheds light on smart pest management'.

BACKGROUND:Insect herbivory poses a major threat to maize. Benzoxazinoids are important anti-insect secondary metabolites in maize, whose biosynthetic pathway has been extensively studied. However, yet little is known about how benzoxazinoids are regulated in maize, partly due to lack of mutant resources and recalcitrance to genetic transformation. Transient systems based on mesophyll- or cultured cell-derived protoplasts have been exploited in several plant species and have become a powerful tool for rapid or high-throughput assays of gene functions. Nevertheless, these systems have not been exploited to study the regulation of secondary metabolites.RESULTS:A protocol for isolation of protoplasts from etiolated maize seedlings and efficient transfection was optimized. Furthermore, a 10-min-run-time and highly sensitive HPLC-MS method was established to rapidly detect and quantify maize benzoxazinoids. Coupling maize protoplast transfection and HPLC-MS, we screened a few genes potentially regulating benzoxazinoid biosynthesis using overexpression or silencing by artificial microRNA technology.CONCLUSIONS:Combining the power of maize protoplast transfection and HPLC-MS analysis, this method allows rapid screening for the regulatory and biosynthetic genes of maize benzoxazinoids in protoplasts, before the candidates are selected for in planta functional analyses. This method can also be applied to study the biosynthesis and regulation of other secondary metabolites in maize and secondary metabolites in other plant species, including those not amenable to transformation.

Atmospheric CO2 levels are rapidly increasing due to human activities. However, the effects of elevated CO2 (ECO2) on plant defense against insects and the underlying mechanisms remain poorly understood. Here we show that ECO2 increased the photosynthetic rates and the biomass of tobacco and rice plants, and the chewing lepidopteran insects Spodoptera litura and Mythimna separata gained less and more mass on tobacco and rice plants, respectively. Consistently, under ECO2, the levels of jasmonic acid (JA), the main phytohormone controlling plant defense against these lepidopteran insects, as well as the main defense-related metabolites, were increased and decreased in insect-damaged tobacco and rice plants. Importantly, bioassays and quantification of defense-related metabolites in tobacco and rice silenced in JA biosynthesis and perception indicate that ECO2 changes plant resistance mainly by affecting the JA pathway. We further demonstrate that the defensive metabolites, but not total N or protein, are the main factors contributing to the altered defense levels under ECO2. This study illustrates that ECO2 changes the interplay between plants and insects, and we propose that crops should be studied for their resistance to the major pests under ECO2 to predict the impact of ECO2 on future agroecosystems.