ABSTRACTThe Boteti palaeo‐estuary in northern Botswana is located where the endoreic Boteti river, an overflow from the regional Okavango river system, enters the Makgadikgadi pans. The present work considers diagenetic silica and calcium carbonate dominated transformations. The aims are to help identify precursor conditions for the origin of microcrystalline silcrete–calcrete intergrade deposits while developing insight into pene‐contemporaneous silica and calcite matrix formation. General precursor conditions require the presence of cyclical endoreic freshwater inflow into a saline pan. The pan should be deep enough to sustain a permanent watertable under climatic conditions sufficient to cause carbonate fractionation within the groundwater. Freshwater inflow into a saline pan drives the geochemistry of the system (from freshwater to saline, from neutral to high pH). The geochemistry is controlled by the periodicity of inflow relative to salinity levels of phreatic groundwater in the receptor saline pan. The source of most silica and localized CaCO3 is derived from the dissolution and precipitation of micro‐fossils, while more general CaCO3 enrichment stems from saline pan based carbonate fractionation. Diagenetic change leads to colloidal then more consolidated bSiO2/CaO aggregate formation (amorphous silica) followed by transformations into opaline silica over time. Irregular zones of siliceous sediment forming in otherwise calcareous deposits may relate to the irregular occurrence of biogenic silica in the source sediments, inferring a source for local silica mobilization in intergrade deposits. The distribution of calcareous micro‐fossils may have a similar converse effect. Diagenetic evidence from an intergrade deposit with a low SiO2/CaO ratio suggests that transformation occurred more into the pan, while an intergrade deposit with a high SiO2/CaO ratio more likely formed closer to a land margin and was frequently inundated by freshwater. Pene‐contemporaneous silcrete–calcrete intergrade formation under the above conditions may take place where dissolved silica crystallizes out in the vicinity of calcite crystals due to local decreases in pH. The continuing consolidation of bSiO2/CaO aggregates may be facilitated by the presence of increasing amounts of calcite. It appears that CaCO3 may act as a catalyst leading to pene‐contemporaneous bSiO2/CaO aggregate formation. However the processes involved require further work. Copyright © 2013 John Wiley & Sons, Ltd.

This work considers the spatial distribution and ages of western MOZ basin siliclastic sediments prior to providing insights into the diagenesis of degraded dune and alluvial fan sands. Previously published and new TL/OSL ages imply that extensive over-washing of dune sands took place at least 100 ka ago while ages on Okavango floodplains imply that the fan was formed ca. 40 ka and has since undergone periods of higher and lower flood regimes. Sediment analyses indicate that both dune and fan sands contain a diagenetic matrix of clay-enhanced amorphous silica (CEAS) which bonds weakly formed aggregates. The time of formation of diagenetic matrix products is inconclusive but may have been accelerated during or shortly after events dated using OSL/TL techniques. Hence earlier dune over-washing may have led to greater porewater of an acidic to near neutral nature which in turn promoted smectite formation and silicic acid precipitation >100000 years ago. The relatively abundant CEAS matrix in floodplain sands implies more recent semi-continuous flood events again of an acidic-near neutral nature leading to the formation of smectite. In this case the floodplain sediments are dated as having been deposited around 40 and 11 ka, when porewater content may have accelerated clay formation and silica dissolution. The dual nature of the CEAS in the islands reflects a changing environment from smectite-dominated flooding events to sepiolite-dominated desiccation events. Flooding may also correspond to TL/OSL ages over the past 40000 years which contributed to accelerated CEAS formation. The sepiolite is associated with a Ca-rich matrix implying desiccation which may relate to drying events over the 40000 year period or to riparian tree root pumping and selective salt accumulation. This work shows that sedimentation in incipient rifts is complex and rarely explained totally in terms of primary depositional events. The implications of different stages of sand diagenesis may be significant in enhancing palaeo-environmental interpretations in semi-arid fluvial environments. (C) 2008 Elsevier B.V. All rights reserved.

The Kalahari sand sheet, with a 2.5-millionha area, is probably the largest continuous surface of sand in the world. The Kalahari Transect (KT) is one of a set of IGBP “megatransects” identified for global change studies and provides an ideal setting to investigate changes in ecosystem dynamics, vegetation composition and structure, and carbon or nutrient cycles along a spatial precipitation gradient without confounding soil effects. Soil physical properties remain poorly characterized along the KT. The present work provides a review of previous studies on the Kalahari soils combined with new results from recent analyses of physical (mostly hydraulic) and biogeochemical properties of the soil. In summary, the Kalahari soil is acidic, dominated by sand and nutrient poor. Nutrient contents, soil textures and soil hydraulic properties differ under and between canopies. Roots are concentrated in the top 80cm of the soil, with grass roots more abundant and dominant close to the surface. Moreover, the distribution of tree roots does not exhibit a clear dominance over grasses at deeper soil layers. This review provides important baseline information for this system, as well as insights as to how biochemical processes vary along a rainfall gradient.

Domestic cockroaches Blattella germanica were trapped from various homes in Gaborone, Botswana using ‘Dyroach’ traps. Isolations of bacteria, yeasts and moulds were done on external body parts and on the faecal pellets using various selective media. Body parts of cockroaches were also fixed with OsO 4 vapour for 24 h, sputter coated with gold under special conditions and examined in a Phillips (1) XL30 ESEM in low vacuum mode. Awide spectrum of bacteria including common food spoilage and pathogenic organisms, such as Bacillus spp., Staphylococcus spp., Escherichia coli, Pseudomonas spp., Enterobacter spp., Klebsiella spp., Erwinia spp. Salmonella sp., Shigella sp. and Serratia spp. were isolated. Yeasts commonly associated with food spoilage, such as Pichia sp., Candida sp. and Torulopsis spp. were found on many cockroaches. In addition, various groups of moulds, some associated with food spoilage and others known to produce mycotoxins, such as Aspergillus flavus, Aspergillus fumigatus and Aspergillus parasiticus were isolated. Antimicrobial sensitivities of bacterial isolates revealed resistance patterns to various agents. Since cockroaches are prevalent in homes, particularly in food preparation areas and since their body parts and faecal pellets have been found in food storage areas, concern about their impact on food quality and safety is raised and possible control measures including education of communities on proper sanitation are suggested.

This work considers new evidence for palaeo-environmental change taking place during the Pleistocene in northern Botswana. Duricrusted strandlines along the northeastern margin of Sua Pan provide palaeo-environmental data pertaining to the Makgadikgadi subbasin (MSB) with inferences regarding the larger Makgadikgadi–Okavango–Zambezi (MOZ) rift depression. Field, XRD and geochemical data show that MSB strandlines comprise calcretes (LU1 type), MgO-rich calcretes with silica (LU2 type), sil-calcrete (LU3 type) and silcrete (LU4 type). Early freshwater episodes appear to have been followed by calcrete-dominated drying phases interspersed with repeated silcretisation. Calcretisation through pan littoral sediments may have been both biogenically and environmentally induced. Calcite precipitation was in part controlled by the Mg/Ca ratio of pore water in the pan littoral zone suggesting closed basin type evaporative conditions, which were followed by a major desiccation interval. Phases of silcrete precipitation appear to be related to periods when the geochemistry of the lake littoral more closely resembled present-day Na–CO3–SO4–Cl-type brines. Silica saturated acidic, moderately saline groundwater preceded Si precipitation which took place as the pH reduced. Si mobilisation occurred (inter alia) as a result of quartz grain dissolution enhanced by diatoms, bacteria and algal growth in the moist pan littoral. SiO2-rich pore waters migrated through cracked and desiccated calcrete into areas of lower salinity and lower pH resulting in preferential calcite removal and silcrete precipitation. Approximate TL dates imply that exposed littoral sand underwent calcretisation during the drying phases of extensive palaeo-lakes which occurred prior to 110 ka, 80–90 ka and 41–43 ka. These wet periods compare fairly well with Vostok core chronologies for southern Africa.

Calcrete deposits of the Qangwa area, northwestern Botswana are evaluated on the basis of satellite imagery and sedimentological analysis. Enhanced Thematic Mapper imagery interpretation combined with field evidence has led to identification of the calcrete. This project aims at making a detailed surficial geology map accompanied by a report as a step in expanding the knowledge of calcretes. It also attempts to develop an understanding of the relationship in the timing of the late Quaternary wetter and drier phases. A digital map using GIS and remote sensing applications was developed from both analysed data and fieldwork. Data analysis revealed five types of calcretes and a calcareous soil. Hardpan calcrete along with brecciated and conglomeratic calcrete dominate the interfluves and are believed to predate the formation of nodular and honeycomb calcrete which occupy the valleys. The older hardpan associated types may have developed following regional wet/warm periods the last of which has been dated elsewhere as occurring c. 120,000. The younger valley calcretes show different mechanisms of formation, and are believed to have been developed following incision and palaeo-lake establishment, c. 25,000 years ago.