Open-ended scientific discovery with large language models (LLMs) increasingly operates as a long-horizon loop of hypothesis search and verification, where a reward signal guides which hypotheses to test next. A notable recent example is AutoDiscovery, which uses "Bayesian surprise" - the belief shift an LLM undergoes after observing evidence for a hypothesis - as both a discovery metric and a reward for search. We first observe that AutoDiscovery treats surprisal as a static quantity, while surprisal in human reasoning is non-stationary - it is defined relative to beliefs that evolve with experience, a prerequisite for continual scientific discovery. We address this mismatch with evidence-informed LLM beliefs: priors updated with evidence from previous hypotheses to compute non-stationary surprisal for new hypotheses. We compare in-context belief-updating mechanisms and find that embedding-based retrieval-augmented generation over prior discoveries best anticipates eventual posteriors, identifying 37.5
Insertion Language Models (ILMs) offer several advantages over left-to-right generation and mask-based generation. However, existing formulations of insertion-based generation have largely been ad-hoc. In this paper, we derive a diffusion-style denoising objective for ILMs from first principles by formulating the noising process as a continuous-time Markov chain on the space of variable-length sequences. We show that previous formulations of ILMs can be viewed as special cases of this denoising framework. Through empirical evaluation on a synthetic planning task, we show that the proposed approach retains the benefits of insertion-based generation over left-to-right generation and masked diffusion models. In language modeling, our diffusion-based approach is competitive with left-to-right generation and masked diffusion models, while offering additional flexibility in sampling compared to existing insertion language models.
Dual and cross encoders have long been mainstays of information retrieval (IR), but are being challenged by the emergent capabilities of LLMs. An LLM-based approach we term pointwise generative ranking - generating tokens the length of a single docID as opposed to a list in order to enable ranking via beam search - combines efficiency and expressivity benefits while leveraging the in-context capabilities of Causal Transformers. Although there is ample evidence to suggest that pretrained LLMs are well-suited for ranking, we find that the vast majority of LLM-based approaches rely on next-token prediction, a loss function which is fundamentally rank-agnostic (and especially so with pointwise supervision). In this paper, we first prove that the expressivity of pointwise generative ranking with multi-token docIDs is superior to that of dual encoders. We then propose SToICaL - a Simple Token-Item Calibrated Loss - which can incorporate rank-aware supervision at both the item and token levels within the pointwise setup. We run a suite of experiments on ranking tasks derived from WordNet (Fellbaum, 1998) and ESCI (Reddy et al., arXiv:2206.06588). Two variants of SToICaL successfully suppress the probability of invalid docID generations and improve on common ranking metrics beyond top-1 retrieval.
In many domains generating variable length sequences through insertions provides greater flexibility over autoregressive models. However, the action space of insertion models is much larger than that of autoregressive models (ARMs) making the learning challenging. To address this, we incorporate trainable order dynamics into the target rates for discrete flow matching, and show that with suitable choices of parameterizations, joint training of the target order dynamics and the generator is tractable without the need for numerical simulation. As the generative insertion model, we use a variable length masked diffusion model, which generates by inserting and filling mask tokens. On graph traversal tasks for which a locally optimal insertion order is known, we explore the choices of parameterization empirically and demonstrate the trade-offs between flexibility, training stability and generation quality. On de novo small molecule generation, we find that the learned order dynamics leads to a significant increase in validity and quality of the generated molecules, when compared to uniform order dynamics.
When Masked Diffusion Models (MDMs) generate sequences through iterative refinement, the rich internal computation over masked positions is discarded, forcing every subsequent refinement step to recompute the valuable internal information stored as model representations. To avoid a hard reset between denoising rounds, we propose Learned Relay Representations (Relay), a method that allows MDMs to be forward-thinking when denoising by explicitly learning how to propagate latent information for the benefit of future denoising steps. Relay introduces a differentiable per-token channel that passes information between forward passes and is trained via truncated backpropagation through time (BPTT). We show that this framework can be scaled to state-of-the-art Diffusion Language Models (DLMs), and is seamlessly compatible with techniques like block diffusion and KV caching. We first provide a thorough justification of the design choices in Relay on a challenging Sudoku-based planning task. We then scale Relay to Fast-dLLM v2, a state-of-the-art DLM, outperforming standard supervised finetuning on coding tasks while reducing inference latency by up to 32
To discover the weaknesses of LLMs, researchers often embed prompts into a vector space and cluster them to extract insightful patterns. However, vector embeddings primarily capture topical similarity; as a result, prompts that share a topic but differ in specificity, and consequently in difficulty, are often represented similarly, making fine-grained weakness analysis difficult. To address this limitation, we propose Prompt2Box, which embeds prompts into a box embedding space using a trained encoder. The encoder, trained on existing and synthesized datasets, outputs box embeddings that capture not only semantic similarity but also specificity relations between prompts (e.g., "writing an adventure story" is more specific than "writing a story"). We further develop a novel dimension reduction technique for box embeddings to facilitate dataset visualization and comparison. Our experiments demonstrate that box embeddings consistently capture prompt specificity better than vector baselines and achieve 45
Area chairs (ACs) play a critical role in the peer-review process, managing conflicts and ensuring fair outcomes. Although AI tools have been proposed to support ACs, little is known about the challenges they face and their perceptions of these technologies. In this paper, we conduct interviews including a design probe with 27 ACs in AI to explore their challenges, strategies, and perspectives on potential AI tools. Through thematic analysis, we identify key tensions arising from the growing volume of submissions, uneven reviewer expertise, and the complex task of managing the relationship between reviewers and authors. Most importantly, we find substantial variation in how ACs engage with submissions and influence outcomes: some adopt a largely hands-off approach, while others take a more hands-on role in guiding discussions and decisions. This variation challenges the notion of a single, universal AC practice and highlights the need to account for diverse approaches. When reflecting on the potential use of AI tools, ACs expressed a cautious stance, drawing on their domain knowledge and heightened awareness of AI limitations. From these findings, we derive three design implications: tailoring AI assistance to diverse AC practices, design assistance for discussion moderation, and embedding human-centered AI principles that preserve human agency in decision-making.
Deep research over data lakes requires an LLM agent to investigate evidence across thousands of heterogeneous tables and passages to synthesize a report. Existing methods perform iterative retrieval and generation, letting accumulated context determine what to investigate next, which can overexploit locally promising evidence and fail to cover distinct semantic regions under a fixed budget. To address this, we cast deep research over data lakes as a budgeted search problem and present Baikal - a framework that clusters heterogeneous evidence into semantic regions, then searches over them adaptively to balance exploration and exploitation. Within each selected region, Baikal generates and investigates region-grounded subquestions, using finding quality as rewards to update region-level value estimates and guide search under policies ranging from random and LLM-guided selection to Bayesian ε-greedy and UCB. We evaluate Baikal on 15 queries each over HybridQA and TAT-QA data lakes containing 10,993 and 2,757 tables, respectively, together with 227K Wikipedia passages and 13K financial report passages. We assess research quality with a new rubric covering groundedness, relevance, diversity, and utility, and use GPT-5-mini to score Baikal and strong baselines, including DeepSearcher and an OpenCode research agent with retrieval and clustering variants. Across both data lakes, Baikal performs strongly under several region-selection policies; its best configuration improves report scores over the strongest baselines by 28
In recent years, there has been a resurgence of interest in non-autoregressive text generation in the context of general language modeling. Unlike the well-established autoregressive language modeling paradigm, which has a plethora of standard training and inference libraries, implementations of non-autoregressive language modeling have largely been bespoke making it difficult to perform systematic comparisons of different methods. Moreover, each non-autoregressive language model typically requires it own data collation, loss, and prediction logic, making it challenging to reuse common components. In this work, we present the XLM python package, which is designed to make implementing small non-autoregressive language models faster with a secondary goal of providing a suite of small pre-trained models (through a companion xlm-models package) that can be used by the research community. The code is available at https://github.com/dhruvdcoder/xlm-core.
Large language models (LLMs) are increasingly being applied to black-box optimization tasks, from program synthesis to molecule design. Prior work typically leverages in-context learning to iteratively guide the model towards better solutions. Such methods, however, often struggle to balance exploration of new solution spaces with exploitation of high-reward ones. Recently, test-time training (TTT) with synthetic data has shown promise in improving solution quality. However, the need for hand-crafted training data tailored to each task limits feasibility and scalability across domains. To address this problem, we introduce MiGrATe-a method for online TTT that uses GRPO as a search algorithm to adapt LLMs at inference without requiring external training data. MiGrATe operates via a mixed-policy group construction procedure that combines on-policy sampling with two off-policy data selection techniques: greedy sampling, which selects top-performing past completions, and neighborhood sampling (NS), which generates completions structurally similar to high-reward ones. Together, these components bias the policy gradient towards exploitation of promising regions in solution space, while preserving exploration through on-policy sampling. We evaluate MiGrATe on three challenging domains-word search, molecule optimization, and hypothesis+program induction on the Abstraction and Reasoning Corpus (ARC)-and find that it consistently outperforms both inference-only and TTT baselines, demonstrating the potential of online TTT as a solution for complex search tasks without external supervision.
Peer-review venues have increasingly adopted open reviewing policies that publicly release anonymized reviews and permit public commenting. Venues have adopted a variety of policies, and there is still ongoing debate about the benefits and drawbacks of decisions. To inform this debate, we surveyed 2,385 reviewers, authors, and other peer-review participants in machine learning to understand their experiences and opinions. Our key findings are: (a) Preferences: Over 80 (b) Benefits: Respondents cite improved public understanding (75.3 (c) Challenges: The top concern is resubmission bias, where rejection history biases future reviewers (ranked top impact of open reviewing by 41 (d) AI and open peer review: Participants believe open policies deter "AI slop" submissions (71.9 Finally, we use AI to annotate 4,244 reviews from ICLR (fully open) and NeurIPS (partially open). We find that the fully open venue (ICLR) has higher levels of correctness and completeness than the partially open venue (NeurIPS). The effect size is small for correctness and very small for completeness, and both are statistically significant. We also find that there is no statistically significant difference in the level of substantiation. We release the full dataset at https://github.com/justinpayan/OpenReviewAnalysis.
The promise of autonomous scientific discovery (ASD) hinges not only on answering questions, but also on knowing which questions to ask. Most recent works in ASD explore the use of large language models (LLMs) in goal-driven settings, relying on human-specified research questions to guide hypothesis generation. However, scientific discovery may be accelerated further by allowing the AI system to drive exploration by its own criteria. The few existing approaches in open-ended ASD select hypotheses based on diversity heuristics or subjective proxies for human interestingness, but the former struggles to meaningfully navigate the typically vast hypothesis space, and the latter suffers from imprecise definitions. This paper presents AutoDiscovery—a method for open-ended ASD that instead drives scientific exploration using Bayesian surprise. Here, we quantify the epistemic shift from the LLM’s prior beliefs about a hypothesis to its posterior beliefs after gathering experimental results. To efficiently explore the space of nested hypotheses, our method employs a Monte Carlo tree search (MCTS) strategy with progressive widening using surprisal as the reward function. We evaluate AutoDiscovery in the setting of data-driven discovery across 21 real-world datasets spanning domains such as biology, economics, finance, and behavioral science. Our results demonstrate that under a fixed budget, AutoDiscovery substantially outperforms competitors by producing 5-29% more discoveries deemed surprising by the LLM. Our human evaluation further reveals that two-thirds of discoveries made by our system are surprising to domain experts as well, suggesting this is an important step towards building open-ended ASD systems.
Personalized search is a problem where models benefit from learning user preferences from per-user historical interaction data. The inferred preferences enable personalized ranking models to improve the relevance of documents to users. However, personalization is also seen as opaque in its use of historical interactions and is not amenable to users' control. Further, personalization limits the diversity of information users are exposed to. While search results may be automatically diversified this does little to address the lack of control over personalization. In response, we introduce a model for personalized search that enables users to control personalized rankings proactively. Our model, CtrlCE, is a novel cross-encoder model augmented with an editable memory built from users' historical interactions. The editable memory allows cross-encoders to be personalized efficiently and enables users to control personalized ranking. Next, because all queries do not require personalization, we introduce a calibrated mixing model which determines when personalization is necessary. This enables users to control personalization via their editable memory only when necessary. To thoroughly evaluate CtrlCE, we demonstrate its empirical performance in four domains of science, its ability to selectively request user control in a calibration evaluation of the mixing model, and the control provided by its editable memory in a user study.
Autoregressive models (ARMs), which predict subsequent tokens one-by-one “from left to right,” have achieved significant success across a wide range of sequence generation tasks. However, they struggle to accurately represent sequences that require satisfying sophisticated constraints or whose sequential dependencies are better addressed by out-of-order generation. Masked Diffusion Models (MDMs) address some of these limitations, but the process of unmasking multiple tokens simultaneously in MDMs can introduce incoherences, and MDMs cannot handle arbitrary infilling constraints when the number of tokens to be filled in is not known in advance. In this work, we introduce Insertion Language Models (ILMs), which learn to insert tokens at arbitrary positions in a sequence – that is, they select jointly both the position and the vocabulary element to be inserted. By inserting tokens one at a time, ILMs can represent strong dependencies between tokens, and their ability to generate sequences in arbitrary order allows them to accurately model sequences where token dependencies do not follow a left-to-right sequential structure. To train ILMs, we propose a tailored network parameterization and use a simple denoising objective. Our empirical evaluation demonstrates that ILMs outperform both ARMs and MDMs on common planning tasks. Furthermore, we show that ILMs outperform MDMs and perform on par with ARMs in an unconditional text generation task while offering greater flexibility than MDMs in arbitrary-length text infilling. The code is available at: https://dhruveshp.com/projects/ilm .
Personalized item recommendation typically suffers from data sparsity, which is most often addressed by learning vector representations of users and items via low-rank matrix factorization. While this effectively densifies the matrix by assuming users and movies can be represented by linearly dependent latent features, it does not capture more complicated interactions. For example, vector representations struggle with set-theoretic relationships, such as negation and intersection, e.g. recommending a movie that is "comedy and action, but not romance". In this work, we formulate the problem of personalized item recommendation as matrix completion where rows are set-theoretically dependent. To capture this set-theoretic dependence we represent each user and attribute by a hyper-rectangle or box (i.e. a Cartesian product of intervals). Box embeddings can intuitively be understood as trainable Venn diagrams, and thus not only inherently represent similarity (via the Jaccard index), but also naturally and faithfully support arbitrary set-theoretic relationships. Queries involving set-theoretic constraints can be efficiently computed directly on the embedding space by performing geometric operations on the representations. We empirically demonstrate the superiority of box embeddings over vector-based neural methods on both simple and complex item recommendation queries by up to 30 % overall.
Highlighting the critical need for stronger safeguards against identity theft in peer review and academia at large and proposing mitigating strategies.
Robust unlearning is crucial for safely deploying large language models (LLMs) in environments where data privacy, model safety, and regulatory compliance must be ensured. Yet the task is inherently challenging, partly due to difficulties in reliably measuring whether unlearning has truly occurred. Moreover, fragmentation in current methodologies and inconsistent evaluation metrics hinder comparative analysis and reproducibility. To unify and accelerate research efforts, we introduce OpenUnlearning, a standardized and extensible framework designed explicitly for benchmarking both LLM unlearning methods and metrics. OpenUnlearning integrates 13 unlearning algorithms and 16 diverse evaluations across 3 leading benchmarks (TOFU, MUSE, and WMDP) and also enables analyses of forgetting behaviors across 450+ checkpoints we publicly release. Leveraging OpenUnlearning, we propose a novel meta-evaluation benchmark focused specifically on assessing the faithfulness and robustness of evaluation metrics themselves. We also benchmark diverse unlearning methods and provide a comparative analysis against an extensive evaluation suite. Overall, we establish a clear, community-driven pathway toward rigorous development in LLM unlearning research.
Large language models have demonstrated impressive performance on commonsense tasks; however, these tasks are often posed as multiple-choice questions, allowing models to exploit systematic biases. Commonsense is also inherently probabilistic with multiple correct answers. The purpose of "boiling water" could be making tea and cooking, but it also could be killing germs. Existing tasks do not capture the probabilistic nature of common sense. To this end, we present commonsense frame completion (CFC), a new generative task that evaluates common sense via multiple open-ended generations. We also propose a method of probabilistic evaluation that strongly correlates with human judgments. Humans drastically outperform strong language model baselines on our dataset, indicating this approach is both a challenging and useful evaluation of machine common sense.
When training node embedding models to represent large directed graphs (digraphs), it is impossible to observe all entries of the adjacency matrix during training. As a consequence most methods employ sampling. For very large digraphs, however, this means many (most) entries may be unobserved during training. In general, observing every entry would be necessary to uniquely identify a graph, however if we know the graph has a certain property some entries can be omitted - for example, only half the entries would be required for a symmetric graph. In this work, we develop a novel framework to identify a subset of entries required to uniquely distinguish a graph among all transitively-closed DAGs. We give an explicit algorithm to compute the provably minimal set of entries, and demonstrate empirically that one can train node embedding models with greater efficiency and performance, provided the energy function has an appropriate inductive bias. We achieve robust performance on synthetic hierarchies and a larger real-world taxonomy, observing improved convergence rates in a resource-constrained setting while reducing the set of training examples by as much as 99%.
Cross-encoder (CE) models which compute similarity by jointly encoding a query-item pair perform better than using dot-product with embedding-based models (dual-encoders) at estimating query-item relevance. Existing approaches perform k-NN search with cross-encoders by approximating the CE similarity with a vector embedding space fit either with dual-encoders (DE) or CUR matrix factorization. DE-based retrieve-and-rerank approaches suffer from poor recall as DE generalizes poorly to new domains and the test-time retrieval with DE is decoupled from the CE. While CUR-based approaches can be more accurate than the DE-based retrieve-and-rerank approach, such approaches require a prohibitively large number of CE calls to compute item embeddings, thus making it impractical for deployment at scale. In this paper, we address these shortcomings with our proposed sparse-matrix factorization based method that efficiently computes latent query and item representations to approximate CE scores and performs k-NN search with the approximate CE similarity. In an offline indexing stage, we compute item embeddings by factorizing a sparse matrix containing query-item CE scores for a set of train queries. Our method produces a high-quality approximation while requiring only a fraction of CE similarity calls as compared to CUR-based methods, and allows for leveraging DE models to initialize the embedding space while avoiding compute- and resource-intensive finetuning of DE via distillation. At test time, we keep item embeddings fixed and perform retrieval over multiple rounds, alternating between a) estimating the test query embedding by minimizing error in approximating CE scores of items retrieved thus far, and b) using the updated test query embedding for retrieving more items in the next round. Our proposed k-NN search method can achieve up to 5 and 54 improvement in k-NN recall for k=1 and 100 respectively over the widely-used DE-based retrieve-and-rerank approach. Furthermore, our proposed approach to index the items by aligning item embeddings with the CE achieves up to 100x and 5x speedup over CUR-based and dual-encoder distillation based approaches respectively while matching or improving k-NN search recall over baselines.