The nucleoprotein N of the human respiratory syncytial virus (HRSV) encases the viral genome, forming a flexible N–RNA nucleocapsid helix that serves as template for the viral polymerase L. Recent structural analysis revealed a non-canonical helical nucleocapsid arrangement that modulates RNA accessibility, yet its impact on polymerase function remains unknown. Here, we identified symmetric dimethylation of residue R27 of N as a critical modulator of nucleocapsid architecture and viral replication. We also showed that the methylase PRMT5 interacts with N and likely catalyses R27 methylation. Molecular dynamics simulations of RNA-free N dimers indicate that R27 methylation enhances opening and closing of the RNA-binding cavity, whereas a methylation-mimicking R27M substitution favours a closed state. Cryo-electron microscopy reveals a canonical, markedly straight R27M helix with increased rise and pitch. These findings demonstrate that post-translational modifications fine-tune interactions between N protomers, shaping nucleocapsid assembly, structure and dynamics, and thereby controlling HRSV replication.
Atypical chemokine receptor 1 (ACKR1) is one of the most promiscuous receptors in the human chemokine system, engaging structurally diverse chemokines through a conformationally flexible N-terminal tail. This same interface is exploited by pathogens, including Plasmodium vivax and Staphylococcus aureus (SA), via a compact sulfotyrosine code. Among pathogenic proteins recognizing ACKR1, the SA leukocidin pair HlgAB is a notable exception. HlgAB-mediated pore formation is only weakly competed by chemokines, the Duffy binding protein, or antibodies targeting the receptor's N-terminus, leaving open how HlgAB engage ACKR1. Combining structural biology approaches with cell-based assays, we show that HlgA and HlgB engage ACKR1 sulfated N-terminus with distinct affinities and site hierarchies, with a single higher-affinity site for sulfated tyrosine 41 present in HlgA but absent in HlgB. Unexpectedly, this N-terminal engagement is dispensable for pore formation; productive lysis instead requires a separate interaction between the toxins and ACKR1 extracellular vestibule. These results define a two-step recognition mechanism, toxin capture by the sulfotyrosine N-terminus followed by vestibule-dependent pore formation, and extend the view that ACKR1 promiscuity arises from distributed, ligand-specific use of multiple receptor surfaces rather than a single adaptable interface.
C-type lectins (CTLs) play key roles in immunity and microbial carbohydrate recognition. In the vector-mosquito Aedes aegypti, the C-type lectin domain-single (CTLD-S) family comprises 34 soluble CTLs whose members are implicated in flavivirus dissemination and microbial homeostasis, yet their organization remains uncharacterized. We combine X-ray crystallography, small-angle X-ray scattering (SAXS), molecular dynamics, and machine learning-based structure prediction to characterize CTLs in Aedes aegypti. We determined the crystal structures of four representative CTLD-S proteins: mosGCTL-1, -3, -6, and -20. All crystals featured an identical homodimer arrangement, positioning both carbohydrate-binding sites on the same molecular face. Dimerization was confirmed in solution and AlphaFold predictions across the entire family indicated that dimer formation may be a unifying feature of CTLD-S proteins. For one mosGCTL structure, paucimannose glycans bound at a Ca2+-dependent site, demonstrating bidentate binding through one dimer. Machine learning-based predictions indicated hundreds of possible CTLD-S heterodimers may be viable, with wide-ranging implications for preferred glycan binding through one dimer. Our findings reveal a conserved dimeric arrangement among mosquito lectins that may underpin ligand recognition relevant to vector-pathogen interactions.
The negative-sense RNA genome of respiratory syncytial virus (RSV) is encapsidated by the viral nucleoprotein N, forming a left-handed helical nucleocapsid which serves as template for the viral polymerase. Specific oligomerization of N along the viral genome necessitates a switch of conformation of N, from the neosynthesized monomeric and RNA-free N protein, named N0, to N-RNA oligomers. Although the binding of the N-terminal part of RSV phosphoprotein P plays the role of chaperone to impair RNA binding to N, N0-P interaction alone is not sufficient to prevent N oligomerization. Here, we explored the potential role of post-translational modifications that could participate in the stability of N0. Among the post-translational modifications specifically identified on recombinant monomeric N, we validated the presence of a phosphorylation site on residue Y88 of N which modulates N oligomerization. Our results suggest that RSV N oligomerization depends on the regulation by post-translational modifications.
The MAJIS (Moons And Jupiter Imaging Spectrometer) instrument on board the ESA JUICE (JUpiter ICy moon Explorer) mission is an imaging spectrometer operating in the visible and near-infrared spectral range from 0.50 to 5.55 μm in two spectral channels with a boundary at 2.3 μm and spectral samplings for the VISNIR and IR channels better than 4 nm/band and 7 nm/band, respectively. The IFOV is 150 μrad over a total of 400 pixels. As already amply demonstrated by the past and present operative planetary space missions, an imaging spectrometer of this type can span a wide range of scientific objectives, from the surface through the atmosphere and exosphere. MAJIS is then perfectly suitable for a comprehensive study of the icy satellites, with particular emphasis on Ganymede, the Jupiter atmosphere, including its aurorae and the spectral characterization of the whole Jupiter system, including the ring system, small inner moons, and targets of opportunity whenever feasible. The accurate measurement of radiance from the different targets, in some case particularly faint due to strong absorption features, requires a very sensitive cryogenic instrument operating in a severe radiation environment. In this respect MAJIS is the state-of-the-art imaging spectrometer devoted to these objectives in the outer Solar System and its passive cooling system without cryocoolers makes it potentially robust for a long-life mission as JUICE is. In this paper we report the scientific objectives, discuss the design of the instrument including its complex on-board pipeline, highlight the achieved performance, and address the observation plan with the relevant instrument modes.
. IntroductionThe surface of Dione, Saturn’s fourth-largest moon, is affected by a variety of processes, both exogenic and endogenic, although the satellite does not seem to be active today [e.g., 1]. Like its neighboring mid-sized icy airless satellites Tethys and Rhea, it exhibits a leading/trailing dichotomy, observed at UV to IR wavelengths [e.g., 2].This dichotomy has also been reported at 2.2 cm wavelengths, in the unique resolved observation acquired by the Cassini Radar on Dione [3, Fig. 1b]. The leading hemisphere is more radar-bright than the trailing hemisphere, implying greater water ice purity on the leading side. This asymmetry may be caused by the deposition of E-ring material on the leading side, and/or by contamination by a non-icy material on the trailing side.Herein, we examine Cassini radiometry observations of Dione.2. Dataset and MethodsThe active radar observations of Dione conducted by the Cassini Radar have been presented and analyzed by [3–5]. Spatially resolved data were acquired during flyby DI163 in 2012, simultaneously in active (radar) and passive (radiometry) modes. The resulting images are shown in Fig. 1; the resolved radiometry data is deconvolved following the method described in [6,7]. A preliminary analysis of the resolved radiometry also points to a leading/trailing dichotomy. Indeed, the leading hemisphere, during late afternoon, should be radiometrically warmer than the trailing hemisphere, assuming uniform albedo, thermal inertia, and emissivity. The fact that the reverse is observed indicates variations in at least one of these properties.Distant radiometry scans have been acquired during four flybys. These data and the disk-integrated antenna temperature they yield are summarized in Table 1. We note cooler disk-integrated temperatures at high latitudes. However, any further interpretations require the use of a thermal model.We simulate the Cassini radiometry antenna temperatures using a combination of thermal, radiative, and emissivity models, similar to the method already applied to Iapetus [8], Enceladus [9], and Rhea [7]. By fitting the simulated antenna temperatures to the observations, we hope to better constrain the thermal, structural, and compositional properties of Dione’s leading and trailing sides. In particular, using the thermal model with the bolometric Bond albedo map derived by [10], it is possible to separate temperature variations caused by local time, albedo, and emissivity, and thus derive a partial emissivity map.References[1] C. J. A. Howett et al. (2018), GRL, 45, pp. 5876-5898[2] P. Schenk et al. (2011), Icarus, 211, pp. 740-757[3] A. Le Gall et al. (2019), GRL, 46, pp. 11747-11755[4] S. J. Ostro et al. (2006), Icarus, 41, pp. 381-388[5] S. J. Ostro et al. (2010), Icarus, 183, pp. 479-490[6] Z. Zhang et al. (2017), Icarus, 281, pp. 297-321[7] L. E. Bonnefoy et al. (2020), Icarus, accepted[8] A. Le Gall et al. (2014), Icarus, 241, pp. 221-238[9] A. Le Gall et al. (2017), Nature Astronomy, 1, 0063 [10] D. G. Blackburn et al. (2012), LPSC 2012, Abstract #1536
IntroductionSome of the comets visited by spacecraft missions display some circular depressions at their surface: 81P/Wild 2 (Brownlee et al. 2004), 9P/Tempel 1 (Belton et al. 2013), 103P/Hartley 2 (Bruck Syal et al. 2013), 67P/C-G (Vincent et al. 2015). For 67P, they consist of circular holes, half holes or cliffs, with a size range of tens of meters to a few hundreds of meters (Ip et al. 2016). Owing to the high precision of the shape model obtained from the Rosetta/OSIRIS images (Preusker et al. 2015, Sierks et al. 2015), it is possible to investigate the thermal processing of 67P’s surface in relation to the formation and evolution of these features (Mousis et al. 2015, Vincent et al. 2015, Guilbert-Lepoutre et al. 2016). MethodsWe aim to investigate the formation and evolution of 67P’s circular depressions (or pits, thereafter) by thermally-induced processes (for instance sublimation and amorphous water ice crystallization) on its current orbit. In a departure from the aforementioned studies, we consider a high-resolution shape model of the nucleus, which allows to study several facets for each pit: at the bottom, and on the walls. For each facet, the complete thermal environment is considered, including self-heating and shadowing, either by neighboring facets or due to the complex global morphology of the comet. We compute the illumination, self-heating and shadowing conditions for 125k facets during a full orbit, with a time step of ~8 min, then use these conditions as an input of a 1D thermal evolution model for each facet. The model includes standard features: heat conduction, phase transitions, gas diffusion, erosion, dust mantling (De Sanctis et al. 2005, 2010, Lasue et al. 2008). Various initial setups have been considered, and many tests were conducted to assess the influence of each parameter. The behaviour of 30 circular depressions (pits, half pits and cliffs) was studied in detail (see Figure 1). Results and discussionWe find that the following processes do not contribute significantly to the evolution of pits: sublimation of CO and CO2, crystallization of amorphous water ice, and dust mantling. When added to the model, they induce a relatively limited effect, altering the results by less than 10%. Sublimation of water, and therefore erosion, is the main acting process. We find that direct illumination is the main driver for gas production and erosion. Self-heating is not negligible, and in many cases, it allows to sustain some processing for longer periods of time and enhance local erosion. This is especially true for surface features located close to the neck, where facets additionally receive the VIS+IR flux from the small lobe. The total flux received per orbit is crucial, so is the flux received at perihelion. In this regard, we find strong differences between the Northern and Southern hemispheres of the nucleus, observed in other studies (Keller et al. 2015, Tosi et al. 2019). Finally, there is a tendency for facets in the North which are directed towards the equator to sustain more erosion than other facets at similar latitudes. At the scale of a given pit, there is a general tendency for cliffs and walls to receive more energy than the bottoms, and thus erode more. With time, the fate of a circular depression on 67P is thus to become wider and shallower. Nevertheless, in limited instances of small deep pits (such as Seth01), self-heating can be the driver for erosion of both the walls and bottom, since direct illumination is very limited. However, local erosion rates remain relatively low compared to erosion rates sustained by pits with direct illumination by the Sun. In general, we find that the erosion sustained after 10 orbits cannot reach the size extent of pits as they were observed by Rosetta. It is therefore very unlikely that current illumination conditions were able to produce those features. This results joins previous studies (Besse et al. 2015, 2017, Guilbert-Lepoutre et al. 2016). Because we have performed this study with a uniform set of thermo-physical parameters for all facets, we cannot exclude that local heterogeneities, such as the presence of ice patches in the bottom of some pits (Lamy et al. 2018) may help accelerate the erosion at depths in those pits. Fig .1: Erosion sustained after 10 orbits in the current illumination conditions (solar+shadowing+self-heating), for a selection of facets in the 125k resolution shape model. AcknowledgementsThis study is part of a project that has received funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (Grant agreement No. 802699). We gratefully acknowledge support from the PSMN (Pôle Scientifique de Modélisation Numérique) of the ENS de Lyon for the computing resources. ReferencesBelton et al. (2013) Icarus, 222, 477-486Besse et al. (2015) EPSC conference, id.EPSC2015-114Besse et al. (2017) ACM conference Brownlee et al. (2004) Science, 304, 1764-1769Bruck Syal et al. (2013) Icarus, 222, 610-624De Sanctis et al. (2005) A&A, 444, 605-614De Sanctis et al. (2010) Icarus, 207, 341-358Guilbert et al. (2016) MNRAS, 462, 146-155Ip et al. (2016) A&A, EDP Sciences, 591, A132Keller et al. (2015) A&A, 583, A34Lamy et al. (2018) COSPAR Scientific Assembly, id. B1.1-6-18 Lasue et al. (2008) P&SS, 56, 1977-1991 Mousis et al. (2015) ApJL, 814, L5 Preusker et al. (2015) A&A, 583, A33Sierks et al. (2015) Science, 347, aaa1044 Tosi et al. (2019) Nat. Astron, 3, 649-658Vincent et al. (2015) Nature, 523, 63-
The leading hemisphere of Saturn’s synchronous moon Iapetus is covered by a low-albedo material, contrasting with its bright trailing hemisphere. This dichotomy is also apparent in radar and microwave radiometry observations, which are sensitive to the properties of the near subsurface. To better understand the regional properties of Iapetus and their variations with depth, we assemble the microwave spectra of its leading and trailing hemispheres. Pre-existing data are combined with new millimetric and centimetric observations acquired with the IRAM 30-meter dish, IRAM NOEMA interferometer, and VLA interferometer. These data, interpreted with the help of a model with vertically uniform thermal properties, reveal complex variations in structure and/or composition with depth on the leading side. Meanwhile, the trailing side emissivity is found to be especially low at all observed frequencies, indicating efficient scattering processes on subsurface structures, as observed on Saturn’s other icy moons. We also report the first observations of Saturn’s retrograde moon Phoebe at these frequencies, which has an emissivity higher than that of the trailing hemisphere of Iapetus and similar to its dark leading side, consistent with the theory that Phoebe is the source of the dark material on Iapetus.
The dynamic interplay between a multimeric phosphoprotein (P) and polymeric nucleoprotein (N) in complex with the viral RNA is at the heart of the functioning of the RNA-synthesizing machine of negative-sense RNA viruses of the order Mononegavirales. P multimerization and N phosphorylation are often cited as key factors in regulating these interactions, but a detailed understanding of the molecular mechanisms is not yet available. Working with recombinant rabies virus (RABV) N and P proteins and using mainly surface plasmon resonance, we measured the binding interactions of full-length P dimers and of two monomeric fragments of either circular or linear N-RNA complexes, and we analyzed the equilibrium binding isotherms using different models. We found that RABV P binds with nanomolar affinity to both circular and linear N-RNA complexes and that the dimerization of P protein enhances the binding affinity by 15–30-fold as compared to the monomeric fragments, but less than expected for a bivalent ligand, in which the binding domains are connected by a flexible linker. We also showed that the phosphorylation of N at Ser389 creates high-affinity sites on the polymeric N-RNA complex that enhance the binding affinity of P by a factor of about 360.
AbstractWe aim at retrieving physical and compositional surface properties of the nucleus of comet 67P/Churyumov-Gerasimenko (hereafter 67P) from VIS-IR hyperspectral images (‘cubes’). Here we report on our progress in the geometric modeling and spectral fitting.IntroductionThe measured cubes have been acquired with VIRTIS-M instrument [1] aboard Rosetta. Starting from a digital shape model of 67P [2], the radiance measured by a pixel results from sub-pixel radiance contributions of several shape model facets weighted by the wavelength-dependent spatial point spread function (PSF) of the instrument. Based on a corresponding sub-pixel geometric modeling, we have computed the weighting coefficients and quantified the PSF [3]. The radiance contribution from a single facet can be simulated from physical and compositional parameters defined on this facet, using a photometric model (Hapke or Shkuratov [4,5]). Besides facilitating the consideration of PSF effects, this approach allows us to better approximate the rugged fine-scale topography of 67P that leads to varying observation/illumination/shadowing conditions on sub-pixel scales. Also, the retrieval of parameters common to multiple acquisitions requires a definition of surface parameters bound to the shape model instead of the respective pixel footprints. In this work, we focus on the spectral fitting of entire sets of cubes.Retrieval algorithmThe Bayesian Multi-Spectrum Retrieval algorithm MSR [6] fits the synthetic spectra to the measured ones by iteratively varying the facet properties. MSR takes into account constraints and Bayesian a priori information on the facet properties (mean values, standard deviations, correlation lengths/times/wavelengths) as well as measurement error information. Moreover, consistency requirements are respected. For instance, for measurements acquired at similar times, there are facet properties (surface roughness, particle size, composition, etc.) that do not change between repeated observations and can be treated and retrieved as common to those observations. To achieve this, MSR regards many measurements of a selected surface region under different illumination and observation conditions, shadowing state, spatial resolution, and at different wavelengths as a single meta-measurement. This is analogous to the meta-measurement formed by measurements at different single wavelengths, called a spectrum.Preliminary resultsAt the present stage, MSR is tested to retrieve maps of shape model facet properties from a meta-measurement encompassing tens of VIRTIS-M-cubes, corresponding to the order of a million measured spectra, see Fig. 1. Panel (a) shows a calibrated and pre-processed measured VIRTIS-M cube, represented at 1 µm, mainly showing 67P’s northern hemisphere.Panel (b) illustrates residual variations when the first-order effect of the complex topography of 67P is removed using the Akimov disk function [5], which describes the photometry of utterly rough surfaces. These residual variations can be due to limits in the applicability of the Akimov disk function or real physical variations in texture or composition. The phase angle (~40°) is too large for substantial opposition effects to show up.In the case where we fit the entire cube using the Hapke model, panel (c) shows very little residual variations that are mainly associated with local terminators and slight PSF model imprecisions. This image illustrates that our present setup allows us to fit the measurements very accurately when the facet properties can vary freely within the frame of our Bayesian regularization for one cube. For this comparison, we selected as free parameters the single-scattering albedo and phase function asymmetry parameter spectra for two intimately mixed endmembers as properties that are constant over all facets, and the relative abundance of the two endmembers along with the roughness angle and filling factor as properties that can vary between facets.Finally, panel (d) exhibits moderate residual variations. Here, we fitted a meta-measurement of 25 cubes at various illumination and observation conditions and displayed the one also represented in the other panels. The fitting took about one week on a desktop computer. Now the facet properties cannot vary as freely as for case (c), because simultaneously they also have to be compatible with all other considered cubes. The retrieved facet properties are therefore more well-grounded candidates for the actual surface properties. This panel demonstrates that using information from many hyperspectral images helps to reduce overfitting. We also note that the here utilized set of free parameters is not able to fully capture the spectral variability of the measurements within the frame of this model, pointing to the necessity of additional free parameters, or difficulties of the Hapke model to simultaneously parameterize the different cubes in a consistent way.At this stage, it is not clear yet, how the retrieved facet properties are related to actual surface properties of 67P. At the meeting we will present different parameter sets that lead to equally well fits and discuss their plausibility. A similar investigation based on the Shkuratov model as well as a detailed error analysis, based on synthetic VIRTIS-M cubes, to investigate interferences between the retrieved and other parameters, are the next steps in this ongoing work. Finally, we expect our approach to be capable of identifying local surface property variations in a physically and mathematically well-grounded way, and we will investigate their correlations with morphologic regions on 67P.AcknowledgementsWe thank the following institutions and agencies for support of this work: Italian Space Agency (ASI, Italy). Centre National d'Etudes Spatiales (CNES, France), DLR (Germany). D.K. acknowledges DFG-grant KA 3757/2-1.References[1] Coradini et al. (2007) Space Sci. Rev. 128, 529. [2] Preusker et al. (2017) A&A 607, L1. [3] Kappel et al. (2019) EPSC-DPS 2019, EPSC-DPS2019-456. [4] Hapke (2012) Theory of Reflectance and Emittance Spectroscopy, 2nd edn. (Cambridge University Press). [5] Shkuratov et al. (2011) Planet. Space Sci. 59, 1326. [6] Kappel (2014) J. Quant. Spectrosc. Rad. 133, 153.
Martian Moon eXploration (MMX) mission by Japan Aerospace Exploration Agency (JAXA) is the third Japanese sample return mission. One of the main mission goals is to decipher the origin of these moons, which will provide important clues on planetary formation and how water is delivered to inner planets.MMX will be launched in September 2024 to Martian system to bring back samples from Phobos conducting detailed observations of Phobos and Deimos, and monitoring Mars’s climate. The mission is five-year round trip with return sample on Earth on July 2029. The spacecraft will arrive to Mars system on August 2025, stay three years, and have QSO (Quasi Satellite Orbits) around Phobos at different altitudes to select the landing sampling sites. The spacecraft will land for several hours on the Phobos surface to collect at least 10g of Phobos regolith using a corer going down to a depth of at least 2cm. MMX may collect Phobos samples in two different sites. After three years the spacecraft will leave the Martian system and return the samples to Earth, completing the first round-trip to the Martian system.The principal objectives of the mission are:To settle the controversy on the origin of the Martian moons by close-up observations and return sample analysis To constrain processes for planetary formation and material transport in the region connecting the inner and outer solar systems To reveal evolutionary processes of the Martian system in the circum-Martian environments A set of mission instruments are defined and under development to achieve the major mission goals. The included instruments are: the wide-angle camera OROCHI (Optical RadiOmeter composed of CHromatic Imagers), the telescopic (narrow-angle) camera TENGOO (TElescopic Nadir imager for GeOmOrphology), the laser altimeter LIDAR (Light Detection and Ranging), CMDM (Circum-Martian Dust Monitor), MSA (Mass Spectrum Analyzer), MEGANE (Gamma rays and Neutrons Spectrometer) provided by NASA, a near-infrared spectrometer MIRS (MMX InfraRed Spectrometer) provided by CNES, SMP sampling device and the sample return capsule. A small Rover (total weight less than 30kg) developed by CNES and DLR is also a part of the mission. The Rover payload includes four scientific instruments: a IR radiometer (miniRAD), a Raman spectrometer (RAX), a stereo pair of cameras looking forward (NavCAM) and two cameras looking at the interface wheel-surface (WheelCAM) and consequent Phobos’ regolith mechanical properties. ESA will participate to the mission assisting with deep space communication equipment. 1. MIRSMIRS instrument is built at LESIA-Paris Observatory in collaboration with four other French laboratories (LAB, LATMOS, LAM, IRAP-OMP), with collaboration and financial support of CNES and close collaboration with JAXA and MELCO. MIRS is an imaging spectrometer in the 0.9 - 3.6 microns spectral band with spectral resolution better than 20 nm. The IFOV is 0.35 mrad and FOV of +/-1.65°. The SNR is higher than 100 up to 3.2 µm in a maximum integration time less than 2s. The detector has dimension of 256 x 256 pixels with pixel pitch of 30 microns. The total mass is lower than 11.9 kg (including 20% margin), and the volume of complete instrument is about 320 x 150 x 400 mm3. 2. MIRS science objectivesMIRS is expected to characterize Phobos and Deimos surfaces and Mars atmospheric composition by remotely identifying diagnostic features in the near-infrared range. MIRS is used to achieve some of the mission-requirements, in particular:1: To grasp the surface distribution of the constituent materials of Phobos. Hydrous minerals and other related minerals should be identified and characterized spectroscopically for main parts of the full body in correspondence with its topography (at horizontal spatial resolutions of 20 m or better) and in a radius of 50 m or more around the sampling point (at spatial resolutions of 1 m or better).For the global areas, MIRS is expected to spectroscopically measure water (ice) (absorption band at 3.0-3.2 μm) and hydrous silicate minerals (features at 2.7-2.8 μm) at the wavelength resolutions (wavelength width) of 20 nm, S/N ratios > 100 and a spatial resolution of 20 m (for +/-30° latitude). The spectral radiometric absolute accuracy is expected to be of 10%, and the relative accuracy of 1%. If possible, also to measure organic matter (3.3.-3.5 μm) and hydrous/anhydrous silicate minerals (1.0 μm). An area within 50 m from a selected sampling spot at 1 m resolution will be also mapped.2: To grasp the distribution of constituent materials of Deimos, from spectroscopic information, clarify the surface distribution of hydrous minerals and other related minerals corresponding to its topography at characteristic parts of the moon with a horizontal spatial resolution of 100 m or better.MIRS is expected to spectroscopically map major regions of Deimos at a spatial resolution better than 100 m for major absorption bands as observed in Phobos.3: To constrain transport processes for dust and water near the Martian surface, continuous observations of the mid- to low-latitude distributions of dust storms, ice clouds, and water vapor in the Martian atmosphere are performed from high altitudes equatorial orbit in different seasons to within 1-hour time resolutions.MIRS is expected to perform observations of distributions of total amount of water vapor columns at 10 km spatial resolutions and spectral radiometric absolute accuracy of 10%, and spectral radiometric relative accuracy of 1% with temporal resolution less than 1-hour for the mid- to low-latitude selected areas. These observations are expected to be performed over several successive days in different seasons. 3. ConclusionsMIRS will allow compositional characterization of Phobos, Deimos and temporal characterization of particular phenomena of Mars atmosphere. It will be also a fundamental instrument to evaluate sampling site candidates and support the selection of the two sampling sites on the Phobos surface.The mission will be able to clarify the origin of the Martian moons and may also be able to elucidate the process of the evolution of the Mars environment.AcknowledgementsMMX is under developed and built by JAXA, with contributions from CNES, DLR and NASA. We thank the MMX JAXA teams for their efforts in defining and building the mission. The MIRS team thanks CNES for the financial support and collaboration to build MIRS instrument.
Digital Elevation Models (DEM) are widely used tools in planetary sciences. Geometric parameters such as pixel orientations and local slopes can be derived from these DEM. However, as any data, DEM have a limited precision (i.e. errors), which yields to the propagation of errors on geometric parameters. Assessing local slopes is necessary for many morphological studies: then, how do the DEM vertical errors propagate on the slope values? To answer to this question, we develop a simple and fast numerical method based on the addition of noise on synthetic DEM. We evaluate the different components of slope errors to define the relationship between input DEM noise and output slope errors. Results can be used as first order estimations to discuss slope maps precision.
Comet 67P/Churyumov-Gerasimenko (hereafter 67P) was the primary target of ESA's Rosetta mission. Hyperspectral images acquired by the Mapping channel of the Visible and InfraRed Thermal Imaging Spectrometer aboard Rosetta can be used to derive physical and compositional surface properties by detailed spectrophotometric analyses. This calls for a precise spatial co-registration between measurements and geometry information. In this work, we improve the wavelength-dependent co-registration and also the spatial consistency of the radiometric calibration. This is accomplished by applying a feature-based image matching method comparing measured 67P nucleus images from the entire mission to corresponding photometric simulations. The derived geometric distortions suggest previously unaccounted optical aberrations of the instrument, in conjunction with non-systematic spacecraft pointing and perspective errors, and discrepancies between the true nucleus shape at data acquisition time and the used digital shape model.
Atypical Chemokine Receptor 3 (ACKR3) belongs to the G protein-coupled receptor family but it does not signal through G proteins. The structural properties that govern the functional selectivity and the conformational dynamics of ACKR3 activation are poorly understood. Here, we combined hydrogen/deuterium exchange mass spectrometry, site-directed mutagenesis, and molecular dynamics simulations to examine the binding mode and mechanism of action of ACKR3 ligands of different efficacies. Our results show that activation or inhibition of ACKR3 is governed by intracellular conformational changes of helix 6, intracellular loop 2, and helix 7, while the DRY motif becomes protected during both processes. Moreover, we identified the binding sites and the allosteric modulation of ACKR3 upon β-arrestin 1 binding. In summary, this study highlights the structure-function relationship of small ligands, the binding mode of β-arrestin 1, the activation dynamics, and the atypical dynamic features in ACKR3 that may contribute to its inability to activate G proteins.
The nucleus of comet 67P/Churyumov-Gerasimenko exhibits a broad spectral reflectance feature around 3.2 µm, which is omnipresent in all spectra of the surface, and whose attribution has remained elusive since its discovery. Based on laboratory experiments, we have shown that most of this absorption feature is due to ammonium (NH4+) salts mixed with the dark surface material. The depth of the band is compatible with semi-volatile ammonium salts being a major reservoir of nitrogen in the comet, which could dominate over refractory organic matter and volatile species. These salts may thus represent the long-sought reservoir of nitrogen in comets, possibly bringing their nitrogen-to-carbon ratio in agreement with the solar value. Moreover, the reflectance spectra of several asteroids are compatible with the presence of NH4+ salts at their surfaces. The presence of such salts, and other NH4+-bearing compounds on asteroids, comets, and possibly in proto-stellar environments, suggests that NH4+ may be a tracer of the incorporation and transformation of nitrogen in ices, minerals and organics, at different phases of the formation of the Solar System.
The polyhistidine (6XHis) motif is one of the most ubiquitous protein purification tags. The 6XHis motif enables the binding of tagged proteins to various metals, which can be advantageously used for purification with immobilized metal affinity chromatography. Despite its popularity, protein structures encompassing metal-bound 6XHis are rare. Here, we obtained a 2.5 Å resolution crystal structure of a single chain Fv antibody (scFv) bearing a C-terminal sortase motif, 6XHis and TwinStrep tags (LPETGHHHHHHWSHPQFEK[G 3 S] 3 WSHPQFEK). The structure, obtained in the presence of cobalt, reveals a unique tetramerization motif (TetrHis) stabilized by 8 Co 2+ ions. The TetrHis motif contains four 6 residues-long β-strands, and each metal center coordinates 3 to 5 residues, including all 6XHis histidines. By combining dynamic light scattering, small angle x-ray scattering and molecular dynamics simulations, We investigated the influence of Co 2+ on the conformational dynamics of scFv 2A2, observing an open/close equilibrium of the monomer and the formation of cobalt-stabilized tetramers. By using a similar scFv design, we demonstrate the transferability of the tetramerization property. This novel metal-dependent tetramerization motif might be used as a fiducial marker for cryoelectron microscopy of scFv complexes, or even provide a starting point for designing metal-loaded biomaterials.
Human metapneumovirus (HMPV) is a major cause of respiratory illness in young children. The polymerase complex of HMPV consists of two obligate components, the L polymerase and its cofactor, the phosphoprotein P. During replication and transcription, the L/P complex traverses the viral RNA genome, which is encapsidated within multimerized N nucleoproteins. An essential interaction between N and a C-terminal region of P is required for tethering of the L/P polymerase to the RNA template. This N-P interaction is also involved in the formation of cytoplasmic viral factories in infected cells, called inclusion bodies. To define how L/P recognizes N-encapsidated RNA (N-RNA) we employed cryogenic electron microscopy (cryo-EM) and molecular dynamics simulations, coupled to polymerase activity assays and imaging of inclusion bodies in transfected cells. We report a 2.9 Å resolution structure of a triple-complex between multimeric N, bound to both RNA and the C-terminal region of P. Furthermore, we also present cryo-EM structures of assembled N in different oligomeric states, highlighting the plasticity of N. Combined with our functional assays, these structural data delineate in molecular detail how P attaches to N-RNA whilst retaining substantial conformational dynamics. Moreover, the N-RNA-P triple complex structure provides a molecular blueprint for the design of therapeutics to potentially disrupt the attachment of L/P to its template.
Human metapneumovirus (HMPV) is a major cause of respiratory illness in young children. The HMPV polymerase (L) binds an obligate cofactor, the phosphoprotein (P). During replication and transcription, the L/P complex traverses the viral RNA genome, which is encapsidated within nucleoproteins (N). An essential interaction between N and a C-terminal region of P tethers the L/P polymerase to the template. This N-P interaction is also involved in the formation of cytoplasmic viral factories in infected cells, called inclusion bodies. To define how the polymerase component P recognizes N-encapsidated RNA (N-RNA) we employed cryogenic electron microscopy (cryo-EM) and molecular dynamics simulations, coupled to activity assays and imaging of inclusion bodies in cells. We report a 2.9 Å resolution structure of a triple-complex between multimeric N, bound to both RNA and the C-terminal region of P. Furthermore, we also present cryo-EM structures of assembled N in different oligomeric states, highlighting the plasticity of N. Combined with our functional assays, these structural data delineate in molecular detail how P attaches to N-RNA whilst retaining substantial conformational dynamics. Moreover, the N-RNA-P triple complex structure provides a molecular blueprint for the design of therapeutics to potentially disrupt the attachment of L/P to its template.
While Saturn's main airless moons are all composed largely of water ice, their respective thermal histories and near environments have led to different regolith compositions and structures. Part of this history is recorded in their subsurface which can be probed by microwaves. Using a combined thermal and radiative transfer model, we here investigate all distant observations acquired in the passive mode of the RADAR on board the Cassini spacecraft (2004–2017) at 2.2-cm wavelength. The joint analysis of the derived disk-integrated emissivities and published radar albedos provides new insights into the purity and maturity of the regolith of Saturn's icy moons. We find that satellite-to-satellite variations and large-scale regional anomalies in microwave signatures primarily reflect different degrees of contamination of the regolith by non-ice compounds. To a lesser extent, they may also point to different concentrations of scatterers in the subsurface; these scatterers must be made of ice and/or void rather than of non-ice contaminants. Enceladus appears to have the cleanest regolith likely due to the geological youth of its surface. Observations also suggest that the current heat flux emanating from this moon is not confined to the South Pole Terrain. In the inner system, the degree of purity of the satellites' regoliths decreases from Enceladus outward likely due to the decrease of the E-ring influx. In the outer system, Phoebe's ring mantles Iapetus' leading hemisphere with a decimetric layer of optically-dark and microwave-absorbent dust. Dione is surprisingly less radar-bright and more emissive than expected from both the observed general trend and the current understanding of its geological history. Another question remains outstanding: why are Saturnian moons, and to a lesser extent Jovian moons, so radar-bright at centimetric wavelengths? Current models assuming purely-random scattering in their subsurface fail to simultaneously reproduce active and passive microwave observations, especially for Saturn's inner moons. This may be due the presence of organized and especially efficient backscattering structures in their subsurface. The challenge is now to identify structures that are geologically plausible.
Digital Elevation Models (DEM) are widely used in planetary sciences, including for the specific case of Mars. DEMs allow us to extract topography parameters necessary in geomorphological studies. However, DEMs are not free from vertical errors, which yields uncertainties in calculations of parameters such as local slopes. In addition, slope maps computed from DEMs often display slope patterns which are not spatially correlated with the original images. We suspect such slope patterns to originate from DEM vertical errors. To investigate this question, we propose a fully numerical method to provide a quantitative analysis of slope errors based on DEM error propagation using synthetic models. We find that the addition of vertical errors following a normal distribution (random noise) leads to the occurrence of slope patterns comparable to those in observed data. Results are similar for the two models of spatially correlated errors. We also provide estimations of slope errors for four martian cameras: HiRISE (High Resolution Imaging Science Experiment), CaSSIS (Colour and Stereo Surface Imaging System), HRSC (High Resolution Stereo Camera) and MOC (Martian Orbiter Camera). These estimations aim to be used as first order uncertainty constraints on local slopes for geomorphological studies.