Invasive alien species (IAS) not only displace nearby indigenous plants and lead to habitat simplification but also cause severe economic damage by invading arable lands. IAS invasion processes involve external forces such as species characteristics, IAS assemblage traits, environmental conditions, and inter-species interactions. In this study, we analyzed the invasion processes associated with the introduction and spread of Ageratina altissima, a representative invasive plant species in South Korea. We investigated 197 vegetation quadrats (2 × 20 m) in regions bordering 47 forests in southern Seoul and Gyeonggi-do, South Korea. A total of 23 environmental variables were considered, which encompassed vegetation, topography, land use, and landscape ecology indices. The model was divided into an edge and an interior model and analyzed using logistic regression and a decision tree (DT) model. The occurrence of Ageratina altissima was confirmed in 61 sites out of a total of 197. According to our analysis, Ageratina altissima easily invaded forest edges with low density. The likelihood of its occurrence increased with lower elevation and gentler slope. In contrast, the spread of Ageratina altissima in the forest interior, especially based on seed spread and permeability, was favored by a lower elevation and gentler slopes. The analysis of Ageratina altissima settlement processes in forest edges coupled with the DT model demonstrated that land characteristics, such as the proximity to urbanized areas and the number of shrub and tree species, play a pivotal role in IAS settlement. In the forest interior, Ageratina altissima did not occur in 68 of the 71 sites where the soil drainage was under 2.5%, and it was confirmed that the tree canopy area had a significant impact on forest spread. Based on these results, it can be assumed that Ageratina altissima has spread in South Korean forests in much the same way as other naturalized species. Therefore, vegetation management strategies for naturalized species should be developed in parallel with land use management policy in regions surrounding forest edges to successfully manage and control Ageratina altissima invasion.
Glomerular diseases, a set of debilitating and complex disease entities, are related to mortality and morbidity. To gain insight into pathophysiology and novel treatment targets of glomerular disease, various types of biospecimens linked to deep clinical phenotyping including clinical information, digital pathology, and well-defined outcomes are required. We provide the rationale and design of the KOrea Renal biobank NEtwoRk System TOward Next-generation analysis (KORNERSTONE). The KORNERSTONE, which has been initiated by Korea Centres for Disease Control and Prevention, is designed as a multi-centre, prospective cohort study and biobank for glomerular diseases. Clinical data, questionnaires will be collected at the time of kidney biopsy and subsequently every 1 year after kidney biopsy. All of the clinical data will be extracted from the electrical health record and automatically uploaded to the web-based database. High-quality digital pathologies are obtained and connected in the database. Various types of biospecimens are collected at baseline and during follow-up: serum, urine, buffy coat, stool, glomerular complementary DNA (cDNA), tubulointerstitial cDNA. All data and biospecimens are processed and stored in a standardised manner. The primary outcomes are mortality and end-stage renal disease. The secondary outcomes will be deterioration renal function, remission of proteinuria, cardiovascular events and quality of life. Ethical approval has been obtained from the institutional review board of each participating centre and ethics oversight committee. The KORNERSTONE is designed to deliver pioneer insights into glomerular diseases. The study design allows comprehensive, integrated and high-quality data collection on baseline laboratory findings, clinical outcomes including administrative data and digital pathologic images. This may provide various biospecimens and information to many researchers, establish the rationale for future more individualised treatment strategies for glomerular diseases. NCT03929887.
Immune checkpoint inhibitor is associated with variety of immune-related adverse events. We present a case of polyneuropathy induced by immune checkpoint inhibitor, which was refractory to steroid and immunoglobulin. While high-dose steroid and immunoglobulin were not effective, we tried rituximab which is effective in other immune-mediated polyneuropathy. After rituximab treatment, patientâs clinical symptom and nerve conduction study finding was markedly improved. We suggest rituximab might be effective in polyneuropathy induced by immune checkpoint inhibitor. Key Words: Autoimmune diseases, Polyneuropathies, Rituximab
In phototrophic plants, the highly conserved and tightly regulated process of chlorophyll (Chl) biosynthesis comprises multi-step reactions involving more than 15 enzymes. Since the efficiency of Chl biosynthesis strongly affects plant productivity, understanding the underlying regulatory mechanisms in crop plants can be useful for strategies to increase grain and biomass yields. Here, we show that rice (Oryza sativa) Phytochrome-Interacting Factor-Like1 (OsPIL1), a basic helix-loop-helix transcription factor, promotes Chl biosynthesis. The T-DNA insertion knockdown ospil1 mutant showed a pale-green phenotype when grown in a natural paddy field. Transcriptome analysis revealed that several genes responsible for Chl biosynthesis and photosynthesis were significantly down-regulated in ospil1 leaves. Using promoter binding and transactivation assays, we found that OsPIL1 binds to the promoters of two Chl biosynthetic genes, OsPORB and OsCAO1, and promotes their transcription. In addition, OsPIL1 directly up-regulates the expression of two transcription factor genes, GOLDEN2-LIKE1 (OsGLK1) and OsGLK2. OsGLK1 and OsGLK2 both bind to the promoters of OsPORB and OsCAO1, as well as some of genes encoding the light-harvesting complex of photosystems, probably promoting their transcription. Thus, OsPIL1 is involved in the promotion of Chl biosynthesis by up-regulating the transcription of OsPORB and OsCAO1 via trifurcate feed-forward regulatory loops involving two OsGLKs.
Rice (Oryza sativa) Phytochrome-Interacting Factor-Like1 (OsPIL1), a basic helix-loop-helix transcription factor, plays an important role in the elongation of internode cells. Recently, we found that OsPIL1 participates in chlorophyll biosynthesis by directly upregulating several genes encoding components of the photosystem apparatus. Here, we show that OsPIL1 negatively regulates leaf senescence in rice. During dark-induced senescence (DIS), ospil1 mutants senesced earlier than wild type; this is opposite to mutants of Arabidopsis PIF4 and PIF5, the closest homologs of OsPIL1. Microarray analysis revealed that during DIS, several senescence-associated genes were upregulated and OsGLKs, negative regulators of leaf senescence, were strongly repressed in ospil1 mutants. Transgenic Arabidopsis plants overexpressing OsPIL1 showed an early senescing phenotype during DIS. In addition, OsPIL1 expressed in Arabidopsis upregulates the transcription of ORESARA1, a major senescence-inducing NAC transcription factor and one of the downstream genes of Arabidopsis PIF4, by directly binding the promoter region. These results indicate that OsPIL1 and Arabidopsis PIF4 have similar functions, but their downstream regulatory cascades have opposite effects.
An invasive disturbance species has caused harm to biodiversity and ecosystem. To address the issue, identifying the characteristics of a habitat for invasive disturbance species is considered for forest management. This study analyzed a status of plant species by field survey based on belt transect method in the capital areas and established a predictive model for invasive disturbance species by logistic regression. As results of the study, the number of herb, vine, and invasive disturbance species and a canopy cover of tree would decrease from the forest edge to core areas (p<0.001). The predictive model was derived with variables of altitude, Topographic Wetness Index, distance to forest edge, and canopy cover of tree. It can be useful in estimating the presence or absence of species and predicting its spatial distribution. Further studies are needed to identify the pathway of introduction, spread, and possibility of germination for understanding the status of invasive disturbance species in more depth.
A method for electrochemical degradation of the perchlorate anion (ClO4-) using mercury film electrode has been studied. Electrochemical method has relatively simple pre-treatment. However, electrochemical method should avoid interference from hydrogen evolution at the applied potential to degradation of perchlorate ion, and thus applied electrode should have large hydrogen overvoltage which suppressed the hydrogen evolution at the working reduction potential to prevent hydrogen evolution. In this study, we used mercury film electrode as a working electrode which has a large overvoltage. Ag / AgCl (sat. NaCl) was used as a reference electrode, and platinum was used as a counter electrode. Mercury film electrode was made by cyclic voltammetry (CV) method. The deposition time was decided as 10 minute, and the stability of the mercury electrode in perchlorate solution was confirmed by CV. The reduction potential of perchlorate was checked by using CV method, and decomposition of perchlo rate was performed by using chronoamperometric (CA) method. Also, ion chromatography (IC) was used to confirm the degradation rates of perchlorate.
Seoul City, as the capital and largest metropolis of South Korea, has high population density, and its remaining forests are extremely fragmented as a result of intensive development. The purpose of this study is to analyze the distribution of the great tit (Parus major) and develop a habitat model. Tits have been known as forest birds that inhabit urban forests in Seoul City. A Seoul biotope map and land cover map were combined, and the urban forest areas were delineated on these maps. As factors affecting the distribution of the great tit, landscape indices were calculated by separating them into intrapatch indices, namely logged patch area (PA), area-weighted mean patch shape index (PSI), tree rate (TR), and tree area (TA), and interpatch indices, namely patch degree (PD), patch betweenness (PB), patch proximity (PP), and difference probability of connectivity (DPC), to analyze the internal properties of the patches and their connectivity by tit occurrence data. The results of a t test analyzing the differences of habitat variables by great tit presence/absence and distribution showed differences in PA (p < 0.05), PSI (p < 0.001), TR (p < 0.01), TA (p < 0.001), PD (p < 0.05), PB (p < 0.01), PP (p < 0.05), and DPC (p < 0.1). In the results of logistic regression modeling, in most cases, more than one model had ΔAICc less than 2.0, suggesting that multiple models may be the best model. In the comprehensive models, the TR, PB, and DPC metrics were the best predictors. Among all variables in the intrahabitat model, PSI was the best predictor of species occurrence. Within the interhabitat model, DPC was the best predictor and had a positive relationship with species occurrence, which is the most important of all the factors. In other words, the great tit is more likely to be found in a large circular forest patch than a small and long-shaped forest patch, and connectivity in the threshold distance is the most important factor in predicting great tit occurrence. These results suggest that ecological potential, not only “location potential” but also “supply potential,” should be considered in fragmented urban forests.
This study established the definition of invasive disturbance species for a sustainable management and biodiversity, and derived the influence factors caused by the species. To define the species, the paper reviewed similar words such as alien species and invasive species, using standard definitions. Also reviewed the results of recent research on the factors of the species. The paper defined the invasive disturbance species as an species whose establishment and spread threaten ecosystems, habitats or species with economic or environmental harm including native and non-native. Through the reviews, The factors were classified as geographic (altitude, slope, and soil, etc.), climate (temperature, precipitation, climate change, etc.) and, anthropogenic (land use, population, road, and human activity, etc.), and species u0026 vegetation structure (species property, local-species richness, and canopy, etc.). Especially, human activity such as urbanization and highways may be associated with both higher disturbance and higher propagule pressure. In the further study, it is required development of mitigation strategies and vegetation structure model against invasive disturbance species in urban forest based on this study.
Light regulates leaf senescence and light deprivation causes large-scale transcriptional reprogramming to dismantle cellular components and remobilize nutrients to sink organs, such as seeds and storage tissue. We recently reported that in Arabidopsis (Arabidopsis thaliana), Phytochrome-Interacting Factor4 (PIF4) and PIF5 promote dark-induced senescence and natural senescence by directly activating the expression of typical senescence-associated genes (SAGs), including ORESARA1 (ORE1) and ETHYLENE INSENSITIVE3 (EIN3). In contrast, phytochrome B (PhyB) inhibits leaf senescence by repressing PIF4 and PIF5 at the post-translational level. Although we found how red light signaling represses leaf senescence in Arabidopsis, it remains unknown whether PhyB and/or PhyA are involved in leaf senescence in rice (Oryza sativa). Here we show that rice phyB knockout mutants (osphyB-1, -2, and -3) exhibited an early senescence phenotype during dark-induced senescence, but an osphyA knockout mutant (osphyA-3) senesced normally. The RT-qPCR analysis revealed that several senescence-associated genes, including OsORE1 and OsEIN3, were significantly up-regulated in osphyB-2 mutants, indicating that OsPhyB also inhibits leaf senescence, like Arabidopsis PhyB. We also found that leaf segments of osphyB-2 senesced faster even under light conditions. Supplementation with nitrogen compounds, such as KNO3 and NH4NO3, rescued the early senescence phenotype of osphyB-2, indicating that starvation is one of the major signaling factors in the OsPhyB-dependent leaf senescence pathway.
Wind power which is one of renewable energies is higher economical efficiency and technical maturity than other renewable energies. Recently, the government of ROK announced to increase the proportion of renewable energy through the National Energy Plan. Also, industry required to deregulate for large-scale wind power as Renewable Portfolio Standard (RPS) is introduced. Wind power whereas the eco-friendly energy, is a serious level of damage of the natural environment and topography when the wind power is located. Therefore, the study selected the indicators required for site selection of wind power and proposed the feasible area for wind power based on wind resource map. We selected the 15 indicators including 12 legal protected area, Ecology and Nature Map, rarity, and connectivity (National Ecological Network). After site selection, we should be considered slope and altitude at the stage of design for wind farm to mitigate the environmental impact. Results of analysis showed that 22.3% of wind resource map is available to locate wind power in real. Through the field survey we had verified the accuracy of the results was significantly correct.
Forests are becoming severely fragmented as a result of land development. South Korea has responded to changing community concerns about environmental issues. The nation has developed and is extending a broad range of tools for use in environmental management. Although legally mandated environmental compliance requirements in South Korea have been implemented to predict and evaluate the impacts of land-development projects, these legal instruments are often insufficient to assess the subsequent impact of development on the surrounding forests. It is especially difficult to examine impacts on multiple (e.g., regional and local) scales in detail. Forest configuration and size, including forest fragmentation by land development, are considered on a regional scale. Moreover, forest structure and composition, including biodiversity, are considered on a local scale in the Environmental Impact Assessment process. Recently, the government amended the Environmental Impact Assessment Act, including the SEA, EIA, and small-scale EIA, to require an integrated approach. Therefore, the purpose of this study was to establish an impact assessment system that minimizes the impacts of land development using an approach that is integrated across multiple scales. This study focused on forest fragmentation due to residential development and road construction sites in selected Congestion Restraint Zones (CRZs) in the Greater Seoul Area of South Korea. Based on a review of multiple-scale impacts, this paper integrates models that assess the impacts of land development on forest ecosystems. The applicability of the integrated model for assessing impacts on forest ecosystems through the SEIA process is considered.On a regional scale, it is possible to evaluate the location and size of a land-development project by considering aspects of forest fragmentation, such as the stability of the forest structure and the degree of fragmentation. On a local scale, land-development projects should consider the distances at which impacts occur in the vicinity of the forest ecosystem, and these considerations should include the impacts on forest vegetation and bird species. Impacts can be mitigated by considering the distances at which these influences occur. In particular, this paper presents an integrated environmental impact assessment system to be applied in the SEIA process. The integrated assessment system permits the assessment of the cumulative impacts of land development on multiple scales. (C) 2013 Elsevier Inc. All rights reserved.
Species distribution modeling is one of the most effective habitat analysis methods for wildlife conservation. This study was for evaluating the suitability of species distribution to distance between forest patches in Seoul city using tits. We analyzed the distribution of the four species of tits: varied tit (Parus varius), marsh tit (P. palustris), great tit (P. major) and coal tit (P. ater), using the landscape indexes and connectivity indexes, and compared the resulting suitability indexes from 100m to 1,000m. As factors affecting to the distribution of tits, we calculated landscape indices by separating them into intra-patch indices (i.e. logged patch area (PA), area-weighted mean patch shape index (PSI), tree rate (TR)) and inter-patch indices (i.e. patch degree (PD), patch betweenness (PB), difference probability of connectivity (DPC)), to analyze the internal properties of the patches and their connectivity by tits occurrence data using logistic regression modeling. The models were evaluated by AICc (Akaike Information Criteria with a correction for finite sample sizes) and AUC (Area Under Curve of ROC). The results of AICc and AUC showed DPC, PA, PSI, and TR were important factors of the habitat models for great tit and marsh tit at the level of distance 500~800m. In contrast, habitat models for coal tit and varied tit, which are known as forest interior species, reflected PA, PSI, and TR as intra-patch indices rather than connectivity. These mean that coal tit and varied tit are more likely to find a large circular forest patch than a small and long-shaped forest patch, which are higher rate of forest. Therefore, different strategies are required in order to enhance the habitats of the forest birds, tits, in a region that has fragmented forest patches such as Seoul city. It is important to manage forest interior areas for coal tit and varied tit, which are known as forest interior species and to manage not only forest interior areas but also connectivity of the forest patches in the threshold distance for great tit and marsh tit as adapted species to the urban ecosystem for sustainable ecosystem management.
The agricultural area is a priority to develop than the natural area for land developments. However, the importance of agricultural biodiversity is emphasized recently. The agricultural area does not only provide food for human and habitat for wild life but also contribute to improve biodiversity. It is necessary to preserve the agricultural area with rich biodiversity. The study was conducted to analyze biodiversity of insects for conservation value assessment of agricultural areas. According to the results of field survey, there is higher biodiversity index in agricultural areas surrounding the forest or small size agricultural areas. By contrast, the index is lower in agricultural areas near roads or in the intensive agricultural area. The results show that there is high biodiversity in agricultural areas, especially margin agricultural area such as below 2ha and over slop rate of 15%. Therefore, further studies should be conducted field survey more to generalize for biodiversity in agricultural area, and establish the criteria to protect agricultural area from land developments.
【Lately, besides promoting the biodiversity of the natural ecosystems, there is a demand for climate change mitigation features that will reduce greenhouse gases and prevent disasters that will bring damages such as torrential rains. However, there was not a lot of discussion on the soils that are key in these features. Therefore, this paper proposes a network (Gold Network) as an alternative that will solve the problem that was filed earlier by figuring out how to compose the soil environment. First, in order to maximize the ecological status and value of the soil, a soil network can be proposed through the vertical and horizontal connections of the fragmented soil. Second, there is a need to understand and research the organic system of the ecosystems as well as the complex perspective of the ecosystem services, not only the fragmentary perspectives of the soil remediation, planting improvements or the other existing elements. Third, there is a need to apply the integrated perspective of the Landscape Ecology, Ecological Engineering and Restoration Ecology for the connectivity of the soil (network) due to it being in the execution of the soil network. If a soil network was to be built, a fundamental ecological network would be realized to not only promote biodiversity but also to prepare effective adaptation to climate change.】
The purpose of this study is to work out strategy for utilization of Environmental Conservation Value Assessment Map (ECVAM) using the user survey. It surveyed system users of ECVAM about its recognition and satisfaction. The results of the survey, the ECVAM became more popular and were highly satisfied with updated data. Especially, the study found a relationship between the satisfaction of ECVAM and accuracy, utilization, and convenience of the system. However, the satisfaction has a difference between user groups, a government official and a agent for EIA including researchers. The satisfaction of the agent group was affected by the convenience, the accuracy, and the utilization in order. In the other hand, the satisfaction of the government official group was affected by the utilization, the convenience, the accuracy, and recognition in order. Therefore, we need to adopt different strategies for educations of ECVAM and publicity activities depending on user groups. To increase the satisfaction of ECVAM, we should research not only to attain pinpoint accuracy, but also to suggest the guideline to utilize the map for a government official.