An echo character mapping study of the western Svalbard continental margin, based on ca. 3980 km of archived sub-bottom profile data, is presented. Four distinct echo character types are recognized. Type I is found on the continental slope and in the fjords as thin, irregularly parallel, sub-bottom reflectors, interpreted as glaciomarine plumes, turbidites and other features resulting from low-energy depositional processes. Type II occurs in the deeper water regions of the slope and basins as continuous, well-stratified, parallel reflectors that are interpreted as hemipelagites, distal turbidites and contourites. Type III, found only on the shelf, comprises continuous, highly reflective reflectors that are interpreted as coarse-grained sediments or exposed bedrock. Type IV occurs in fjords and shelf regions and is characterized by a single sub-bottom reflector with a transparent unit; it is interpreted as poorly sorted glacial diamict. This study also mapped numerous seabed features, including debris flow lobes, channel systems, pockmarks and gas chimneys. It illustrates how echo character mapping furthers our understanding of processes on the margin and contributes to reconstructing palaeoceanographic and palaeoclimatic conditions.

ABSTRACT To implement effective management and conservation strategies, an understanding of the spatial ecology, habitat preferences and movement of demersal elasmobranchs is required. This study combines a photographic survey obtained from an autonomous underwater vehicle (AUV) with existing bathymetric data to help understand elasmobranch ecology within the Firth of Lorn, western Scotland. This area is within the Loch Sunart to Sound of Jura Marine Protected Area (MPA) and designated for the protection of the critically endangered flapper skate ( Dipturus intermedius ). Two areas of seabed were surveyed using an AUV in water depths of 110–165 m southwest of the Isle of Kerrera. Eight surveys were conducted in total, four in each area. Each area was surveyed twice over 2 days in October 2020 and twice in 2 days in May June 2021. One day used bait on the seabed (October) whilst all the others had no bait. For each survey, the AUV travelled 17 km at a height of 2 m above the seabed in a lawnmower pattern providing 0.5 km 2 photographic coverage for ~2 h per survey. Five elasmobranch species, two scyliorhinids ( Scyliohinus canicula and Galeus melastomus ) and three rajiformes ( D. intermedius , Raja clavata and Leucoraja naevus ), were identified from a total of 43 k seabed photographs. In total 42 individual animals and 7 egg cases were observed. Although the AUV had short survey times and small study areas the results are encouraging for AUVs being a useful tool in understanding elasmobranch ecology.

The Falls of Lora (FoL), Loch Etive, illustrates a highly energetic tidal site across a shallow (mean depth = 8 m) fjordic sill. The FoL hydrodynamics have been investigated using an acoustic Doppler current profiler (ADCP), a numerical flow model, water-level data and meteorological data. Additionally, four bathymetric timeseries datasets (from February 2014, September 2020, November 2021 and June 2022) provided alternative indication of flow variability by monitoring the geometry of submarine sediment bedforms. A correlation of 0.22 (-0.2 < 97.5% confidence interval < 0.2) was found between catchment-integrated precipitation and residual water height (with effects of tide and atmospheric pressure removed). Residual water height varied by 0.77 m. Artificially increasing the water height by up to 0.6 m at the model's up-fjord open boundary to emulate the effects of precipitation increased (decreased) peak depth-averaged flow speed of the ebb (flood) jet by 0.44 m/s (0.34 m/s) whilst modifying residual flow fields around the FoL. The freshwater-modified residual flow correlated with the westward displacement of a flow transverse sediment ridge observed in two bathymetric surveys conducted after periods of relatively high precipitation. Additionally, in one of the surveys associated with increased precipitation, wavelength stretching in the sediment dunes was observed uniquely at the western approach to the FoL, dominated by the freshwater-enhanced ebb flow. Increasing the water levels of the up-fjord boundary from 0.1 to 0.6 m resulted in an increased mean bedload transport of 2.28 x 10(-5) m(3)/s (370% increase) for these dunes dominated by the ebb current. Whereas Loch Etive has an anomalously high freshwater influence on sill flow compared with other Scottish fjords, it is predicted that freshwater inputs are a significant influence on sill hydrodynamics and nearby sediment transport pathways in other fjordic systems.

Ocean biodiversity loss is being driven by several anthropogenic threats and significant efforts are required to halt losses and promote healthy marine ecosystems. The establishment of a network of Marine Protected Areas (MPAs) can help restrict damaging activities and have been recognised as a potential solution to aid marine conservation. When managed correctly they can deliver both ecological and socio-economic benefits. In recent times, MPA designations have increased rapidly while many countries have set future MPA targets for the decades ahead. An integral element of MPA management is adequate monitoring that collects data to assess if conservation objectives are being achieved. Data acquired by monitoring can vary widely as can the techniques employed to collect such data. Ideally, non-destructive and non-invasive methods are preferred to prevent damage to habitats and species, though this may rule out a number of traditional extractive sampling approaches such as dredges and trawls. Moreover, advances in ocean observation technologies enable the collection of large amounts of data at high resolutions, while automated data processing is beginning to make analyses more logistically feasible and less time-consuming. Therefore, developments to existing marine monitoring techniques and new emerging technologies have led to a diverse array of options when choosing to implement an MPA monitoring programme. Here, we present a review of new and existing non-extractive techniques which can be applied to MPA monitoring. We summarise their capabilities, applications, advantages, limitations and possible future developments. The review is intended to aid MPA managers and researchers in determining the suitability of available monitoring techniques based on data requirements and site conditions.

&lt;p&gt;Rapid climate change (RCC) during the Holocene, particularly post-dating the demise of large Northern Hemisphere ice sheets after 8000 cal. yr BP, is a global phenomenon and is almost certainly driven by long-term changes in insolation, upon which solar variability, although a weak direct forcing mechanism, is superimposed. At least five significant intervals are identified in numerous palaeoclimate records since the major 9000-8000 cal. yr RCC, within which the intensively studied 8200 cal. yr &amp;#8216;event&amp;#8217; is embedded; these are: 6000-5000, 4200-3800, 3500-2500, 1200-1000 and 600-150 cal. yr BP. Most of the Holocene RCCs are associated with bipolar cooling, an expansion-intensification of high latitude circulation systems and drying-aridity at low latitudes.&lt;/p&gt; &lt;p&gt;Here, we present proxy-records from a fjord basin located on the Atlantic margins of NW Europe which contain evidence for these combined forcing mechanisms. Giant piston core (MD04-2832) from the main basin of Loch Sunart, Argyll, NW Scotland, is 22 m long and appears to contain a record of continuous sedimentation back to nearly 8000 cal. yr BP. Based upon the age-depth model for core MD04-2832, isotopic shifts recorded in the benthic foraminifera &lt;em&gt;Ammonia beccarii&lt;/em&gt; coincide with both the rate and magnitude of the Holocene RCCs. We show that the renewal history of bottom waters in the fjord basins appear to be driven by large-scale atmospheric circulation changes that may have characterised the entire mid-latitude NE Atlantic region.&lt;/p&gt;

The Pentland Firth between mainland Scotland and Orkney is an area of the UK continental shelf that experiences extreme tidal flows (>3 m/s). This study presents a time series of bathymetric data coupled with a tidal flow model to examine hydrodynamics and bedform response at the eastern approaches to the Pentland Firth. These observations were additionally augmented by sediment grain type and ADCP data to validate the numerical flow model. Tidal flows of the Pentland Firth result from a tidal phase difference between the east and west approaches to the channel. A resulting barotropic pressure gradient leads to flow accelerations that locally exceed 5 m/s. The extreme tidal setting of the Pentland Firth's eastern approach was found to promote distinct bedforms that are spatially varied in geomorphology with distance from the Pentland Firth. Sediment analysis also showed a decreasing grain size trend also with distance from the Pentland Firth. The modelled residual tidal current shows strong agreement with the sediment transport pathways, supported by the bedform migration direction. The energetic tidal flows of the Pentland Firth's eastern approach interacts with the highly irregular coastline, generating residual tidal counter currents leeward of flow obstructions. These counter currents (i.e. residual tidal current vortices) were reflected in bedform migrations and thence the sediment transport pathways. As the Pentland Firth is considered as a bedload parting site, the residual tidal current vortices are expected to influence the rate of erosion at the bedload parting site, by recirculating sediment back upstream as a counter current inshore of the main flow. The modification of sediment transport pathways by residual tidal current vortices may affect the development of nearshore and offshore engineering, and should be considered in any initial site assessment.

Sub-surface sampling of marine sediments allows investigation of paleo-depositional conditions and subsequent modification by post-depositional geochemical processes. This sedimentary record can encompass many thousands of years and record discrete events where proximal and distal material is incorporated into the pelagic sediment column. The Arctic Ocean is the world’s smallest ocean, however evidence from sedimentary records show it has a pivotal role in the regulation of many oceanographic and physiographic processes. Despite this, there are only limited studies on the distribution and geochemical behaviour of metals within sub-surface marine sediments of the Arctic Ocean basin. This study presents a detailed geochemical investigation for two sediment piston cores to a maximum of 5.7 metres depth and spanning at least 44,000 years BP, from two seamounts bordering the western flanks of the Molloy Hole in the Fram Strait. Comparison to other studies of sub-surface ridge sediments below 60oS on the Mid-Atlantic Ridge reveals these piston cores contain elevated metal concentrations, particularly for Mn, Co, and Ni. Distinct variability is observed within, and between the cores; particularly the interplay between Fe and Mn, the two most common authigenic elements in marine pelagic sediments. Within the Molloy Ridge neovolcanic zone, in the upper half of the easternmost core (PC127/79), Fe and Mn are decoupled and metal distribution is controlled by redox front migration. Decoupling occurs as Mn is more readily dissolved compared to Fe, and Fe in solution is more reactive and precipitates quicker during remobilisation. In PC127/79, Mn is strongly associated with other redox-sensitive metals (e.g., Co, Ni, Mo, U) likely in Mn-oxide dominated horizons, and Fe is strongly associated with V and As. Towards the base of the core, Fe and Mn are coupled, but are not associated with a distinct discrete metalliferous signature of Co, Ni, Cd and Ti. These metals are also negatively associated with major rock-forming elements such as Si, Al, Mg, and Ca. In the western core (PC127/80), Fe and Mn are coupled, are positively associated with the majority of metals and the major rock forming elements, and negatively correlated with common clay-derived components. Investigation of pelagic versus hydrothermal component indices indicate that the distinct metalliferous signature towards the base of PC127/79 may have a hydrothermal origin. Hydrothermal activity associated with ultramafic oceanic core complexes is known on superslow-spreading ridges to the north and south of the Molloy Ridge, however contributions of metals from ice-rafted debris or past mass wasting events off the Spitsbergen margin cannot be ruled out.

Fjord sediments are recognized as hotspots for the burial and storage of organic carbon, yet little is known about the long-term drivers of significant terrestrial organic carbon (OC) transfers into these coastal carbon stores. The mid-latitude fjord catchments of Scotland have a long history of human occupation and environmental disturbance. We provide new evidence to show that increased anthropogenic disturbances over the last 500 years appear to have driven a step change in the magnitude of terrestrial OC transported to the coastal ocean. Increased pressures from mining, agriculture and forestry over the latter half of the last millennium have destabilized catchment soils and remobilized deep stores of aged OC from the catchment to the coastal ocean. Here we show that fjord sediments are capable of acting as highly responsive and effective terrestrial OC sinks, with OC accumulation rates increasing up to 20% during the peak period of anthropogenic disturbance. The responsiveness and magnitude of the fjord OC sink represents a potentially significant time-evolving component of the global carbon cycle that is currently not recognized but has the potential to become increasingly important in the understanding of the role of these coastal carbon stores in our climate system.

Marine robots have the potential to enhance WIO marine research to improve regional adaptation to the challenges presented by climate change by providing enhanced research capacity that bypasses the requirement for expensive infrastructure, such as large research vessels. This paper tests this potential and assesses the readiness of WIO communities to adopt autonomous technologies to meet its marine research priorities. We apply a range of analyses to a marine robots case study undertaken in waters around the island of Pemba, part of the Zanzibar archipelago, in Tanzania in 2019. The campaign formed part of a multinational project focused on increasing WIO capacity to meet food security and ocean sustainability challenges. A community engagement programme with six Tanzanian coastal communities resulted in positive changes in attitudes towards marine robots with reported increases in understanding and acceptance of such technologies. Suspicion of the robots was reduced and a lower risk of removing operational equipment was recorded following the provision of educational material. Cost, risk and benefit analysis shows that marine robots are perceived to provide high level benefits, but come at a high cost that is difficult to achieve using national or regional funding. An assessment of the capacity of WIO marine institutes to adopt such technologies shows that prior to this work, few skills or infrastructure related to marine robots were available to researchers and further confirmed that funding opportunities were perceived to be largely unavailable at institutional, national, regional or international levels. Responses from regional partners following completion of the case study however, revealed an uplift in perceived capacity, particularly related to access to infrastructure and expertise as well as support and opportunities for funding at each level. The presented case study is shown to have been a valuable demonstrator of the benefits of using marine robots to meet WIO coastal ocean research requirements and regional capacity was shown to be substantially increased within the broad range of marine institutes surveyed throughout the case study period. This study demonstrates that taking early steps towards adopting marine autonomous robots has increased WIO regional marine research capacity and increased the confidence and willingness of local researchers to seek alternative solutions to ongoing marine research challenges. Recommendations for future action that will continue to increase the capacity and readiness for regional adoption of marine robots include investment at local, national and regional levels to provide accessible training opportunities and to facilitate regional and international collaborations; investment in a regional hub, or centre of excellence for marine robotic technology; early adoption of newly emerging smaller, cheaper autonomous technologies; investment in local skills and support facilities to aid local buy-in and acceptance while supporting regional capacity.

Sub-seabed gas is commonly associated with seabed depressions known as pockmarks-the main venting sites for hydrocarbon gases to enter the water column. Sub-seabed gas accumulations are characterized by acoustically turbid or opaque zones in seismic reflection profiles, taking the form of gas blankets, curtains or plumes. How the migration of sub-seabed gas relates to the origin and distribution of pockmarks in nearshore and fjordic settings is not well understood. Using marine geophysical data from Loch Linnhe, a Scottish fjord, we show that shallow sub-seabed gas occurs predominantly within glaciomarine facies either as widespread blankets in basins or as isolated pockets. We use geospatial 'hot-spot' analysis conducted in ArcGIS to identify clusters of pockmarks and acoustic (sub-seabed) profile interpretation to identify the depth to gas front across the fjord. By combining these analyses, we find that the gas below most pockmarks in Loch Linnhe is between 1.4 m and 20 m deep. We anticipate that this work will help to understand the fate and mobility of sedimentary carbon in fjordic (marine) settings and advise offshore industry on the potential hazards posed by pockmarked seafloor regions even in nearshore settings.

Acoustic methods are routinely used to provide broad scale information on the geographical distribution of benthic marine habitats and sedimentary environments. Although single-frequency multibeam echosounder surveys have dominated seabed characterisation for decades, multifrequency approaches are now gaining favour in order to capture different frequency responses from the same seabed type. The aim of this study is to develop a robust modelling framework for testing the potential application and value of multifrequency (30, 95, and 300 kHz) multibeam backscatter responses to characterize sediments’ grain size in an area with strong geomorphological gradients and benthic ecological variability. We fit a generalized linear model on a multibeam backscatter and its derivatives to examine the explanatory power of single-frequency and multifrequency models with respect to the mean sediment grain size obtained from the grab samples. A strong and statistically significant (p < 0.05) correlation between the mean backscatter and the absolute values of the mean sediment grain size for the data was noted. The root mean squared error (RMSE) values identified the 30 kHz model as the best performing model responsible for explaining the most variation (84.3%) of the mean grain size at a statistically significant output (p < 0.05) with an adjusted r2 = 0.82. Overall, the single low-frequency sources showed a marginal gain on the multifrequency model, with the 30 kHz model driving the significance of this multifrequency model, and the inclusion of the higher frequencies diminished the level of agreement. We recommend further detailed and sufficient ground-truth data to better predict sediment properties and to discriminate benthic habitats to enhance the reliability of multifrequency backscatter data for the monitoring and management of marine protected areas.

Information on the spatial distribution of habitats and vulnerable species is important for conservation planning. In particular, detailed knowledge on connectivity of marine ecosystems in relation to depth and seafloor characteristics is crucial for any proposed conservation and management actions. Yet, the bulk of the seafloor remains under-sampled, unstudied and unmapped, thereby limiting our understanding of connections between shallow and deep-water communities. Recent studies on mesophotic coral ecosystems (MCEs) have highlighted the Western Indian Ocean as a particularly understudied marine region. Here we utilise an autonomous underwater vehicle (AUV) to collect in-situ temperature, oxygen concentration, bathymetry, acoustic backscatter and photographic data on benthic communities from shallow (<30 m) and mesophotic (30-150 m) depths at selected sites in the Greater Pemba Channel, Tanzania. Further, we use generalised additive models (GAMs) to determine useful predictors of substratum (hard and sand) and benthic community type (coral, turf algae, fleshy algae, fish). Our results revealed the presence of a complex seafloor characterised by pockmarks, steep slopes, submarine walls, and large boulders. Photographs confirmed the presence of MCE composed of corals, algae and fishes on the eastern margins of the Pemba Channel. The GAMs on the presence and absence of benthic community explained 35%-91% of the deviance in fish and fleshy algae assemblages, respectively. Key predictors of the distribution of hard substrata and the coral reef communities were depth, showing the upper boundary of MCEs present at 30-40 m, and seafloor slope that showed more occurrences on steep slopes. The upper 100 m of water column had stable temperatures (25-26 degrees C) and oxygen concentrations (220-235 mu mol/l). We noted the presence of submarine walls, steeply inclined bedrock, which appeared to support a highly bio-diverse community that may be worthy of particular conservation measures. Our results also highlight the capability of using marine robotics, particularly autonomous vehicles, to fill the knowledge gap for areas not readily accessible by divers or with surface vessels, and their potential application for the initial survey and subsequent monitoring of Marine Protected Areas.

The growing interest in tidal energy has led to a need to better understand the interaction between energetic tidal flows and submarine bathymetry. The Gulf of Corryvreckan (GoC) is a highly energetic tidal channel,-3.2 km long and-1.1 km wide with a maximum depth of 220 m occurring between the islands of Scarba and Jura, western Scotland, UK. A high-resolution bathymetric survey of the region, groundtruthed by sediment samples, has enabled the bathymetry to be related to Lagrangian flow data from GPS-tracked surface drifter buoys. The maximum recorded drifter velocity was 4.75m/s within the GoC during the ebb (east-flowing) tide. Exiting the GoC into open water to the west on the flood tide, the 'Great Race' decelerates and subsequently flows in a curve to the north. East and west of the GoC, sedimentary bedforms lie on the flanks of the main flow paths. The northern flank of the Great Race aligns with a 6 km elongate bedform ('banner bank') extending from the GoC. East of the GoC, complex tidal bottom flows are suspected to result in uncommon sediment morphology, including suspected sediment wave interference patterns expressed by the mobile bedforms. The novelty of these findings indicates the importance of further research into sediment pathways in energetic tidal zones. A greater understanding of how sediment transport may be modified during offshore construction is an important consideration for offshore installations and the feasibility of marine renewables.

Understanding anthropogenic radionuclide biogeochemistry and mobility in natural systems is key to improving the management of radioactively contaminated environments and radioactive wastes. Here, we describe the contemporary depth distribution and phase partitioning of 137Cs, Pu, and 241Am in two sediment cores taken from the Irish Sea (Site 1: the Irish Sea Mudpatch; Site 2: the Esk Estuary). Both sites are located ~10 km from the Sellafield nuclear site. Low-level aqueous radioactive waste has been discharged from the Sellafield site into the Irish Sea for >50 y. We compare the depth distribution of the radionuclides at each site to trends in sediment and porewater redox chemistry, using trace element abundance, microbial ecology, and sequential extractions, to better understand the relative importance of sediment biogeochemistry vs. physical controls on radionuclide distribution/post-depositional mobility in the sediments. We highlight that the distribution of 137Cs, Pu, and 241Am at both sites is largely controlled by physical mixing of the sediments, physical transport processes, and sediment accumulation. Interestingly, at the Esk Estuary, microbially-mediated redox processes (considered for Pu) do not appear to offer significant controls on Pu distribution, even over decadal timescales. We also highlight that the Irish Sea Mudpatch likely still acts as a source of historical pollution to other areas in the Irish Sea, despite ever decreasing levels of waste output from the Sellafield site.

A review of multibeam echo sounder (MBES) survey data from five locations around the United Kingdom northwest coast has led to the identification of a total of 14 separate subaqueous mass movement scars and deposits within the fjords (sea lochs) and coastal inlets of mainland Scotland, and the channels between the islands of the Inner Hebrides. In these areas, Quaternary sediment deposition was dominated by glacial and glaciomarine processes. Analysis of the morphometric parameters of each submarine mass movement has revealed that they fall into four distinct groups of subaqueous landslides; Singular Slumps, Singular Translational, Multiple Single-Type, and Complex (translational & rotational) failures. The Singular Slump Group includes discrete, individual subaqueous slumps that exhibit no evidence of modification through the merging of several scars. The Singular Translational Group comprise a single slide that displays characteristics associated with a single translational (planar) failure with no merging of multiple events. The Multiple Single-Type Group incorporates scars and deposits that displayed morphometric features consistent with the amalgamation of several failure events of the same type (e.g. debris flows or slumps). Finally, the Complex (translational & rotational) Group comprises landslides that exhibited complex styles of failures, including both translational and rotational mechanisms controlling the same slide. The submarine mass movements that comprise this dataset are then discussed in relation to global fjordic and glaciomarine nearshore settings, and slope failure trigger mechanisms associated with these environments are described with tentative links to individual submarine landslides from the database, where appropriate. It is acknowledged that additional MBES data are needed not only to expand this database, but also in order to create a more statistically robust study. However, this initial study provides the basis for a much wider investigation of subaqueous mass movements and correlations between their morphometric parameters.

Abstract. Fjord sediments are recognized as hotspots for the burial and storage of organic carbon, yet little is known about what drives the formation of these coastal carbon stores and how this has altered over time. Here we show that fjords can act as sustained hotspots for carbon burial and storage over Holocene timescales. Further we investigate the role of North Atlantic climate and humans in the evolution of a coastal carbon store using sediment records from a temperate Scottish fjord. Our findings indicate that climate and anthropogenic activity have independently driven increases in terrestrial carbon to the marine environment. When both these drivers were coupled, the terrestrial response was pronounced and the relative proportion of terrestrial OC in the marine sediments increases from 5 % up to 70 %. We hypothesize that sustained human disturbance through the late Holocene sensitized the catchment to abrupt climate reorganizations. The results highlight the importance of fjords for carbon burial and the significance of terrestrial carbon subsidy to the long-term carbon store.

Pockmarks are seabed depressions that represent primary evidence of rapid biogenic/thermogenic gas build up and fluid release from seabed sediments to the water column. We use a Geographical Information System (GIS) to analyse multibeam echo-sounder bathymetric data and use a range of semi-automated tools to map seabed pockmarks in fjords and adjacent coastal waters around western Scotland. We map 1019 individual pockmarks in 12 different hydrographic areas covering ca. 2019 km(2). We use morphological metrics and statistical procedures to classify and analyse the variety of pockmark forms. A k-means clustering algorithm identifies three classes of pockmark morphology: deep, elongate and regular. The recognition of separate pockmark classes could aid understanding of their age, activity and origin. This work presents the first detailed mapping of pockmark fields in Scottish west coast waters and highlights the use of pockmarks as an indicator of the quantity, mobility and fate of stored carbon.

Kongsfjorden, a fjord in north-western Svalbard, is characterized by large environmental gradients driven by meltwater processes along the margins of tidewater glaciers and the inflow of relatively warm Atlantic Water, the main heat source for the European Arctic. These factors make Kongsfjorden a key area to investigate changes in the polar climate–ocean–glacier system and to examine the resulting effects on the marine environment. The aim of this paper is to synthesize knowledge about the marine sedimentary environment in Kongsfjorden since the last deglaciation. Fjords act as natural sedimentary traps, archiving information about past and present environmental conditions and changes. Geological studies of Kongsfjorden have demonstrated a good potential for reconstructing palaeoenvironments and establishing baselines values for the natural climate changes in the Arctic. Palaeoceanographic reconstructions reveal rising water temperatures similar to modern temperatures ca. 12 000 years ago. The extent of warm Atlantic Water entering the fjords influences processes at, and the stability of, the margins of the tidewater glaciers. Enhanced inflow may cause accelerated glacial melting that, in consequence, leads to an increase in the sediment flux from the glacial catchments into the fjord, as observed ca. 12 000 years ago and at present. However, responses of sediment flux to modern environmental changes remain poorly understood, hence long-term and monitoring studies are needed to quantify and model the effects of climate warming on the sedimentary environment of Kongsfjorden.

[Extract from Executive Summary] This project, aimed at the development of a novel, automated mechanism for the collection of scallop stock data was a sub-part of the Scottish Inshore Fisheries Integrated Data Systems (SIFIDS) project. The project reviewed the state-of-the-art remote sensing (geophysical and camera-based) technologies available from industry and compared these to inexpensive, off-the -shelf equipment. Sea trials were conducted on scallop dredge sites and also hand-dived scallop sites. Data was analysed manually, and tests conducted with automated processing methods. It was concluded that geophysical acoustic technologies cannot presently detect individual scallop but the remote sensing technologies can be used for broad scale habitat mapping of scallop harvest areas. Further, the techniques allow for monitoring these areas in terms of scallop dredging impact. Camera (video and still) imagery is effective for scallop count and provide data that compares favourably with diver-based ground truth information for recording scallop density. Deployment of cameras is possible through inexpensive drop-down camera frames which it is recommended be deployed on a wide area basis for further trials. In addition, implementation of a ‘citizen science’ approach to wide area recording is suggested to increase the stock assessment across the widest possible variety of seafloor types around Scotland. Armed with such data a full, statistical analysis could be completed and data used with automated processing routines for future long-term monitoring of stock.

Polar and subpolar ecosystems are highly vulnerable to global climate change with consequences for biodiversity and community composition. Bacteria are directly impacted by future environmental change and it is therefore essential to have a better understanding of microbial communities in fluctuating ecosystems. Exploration of Polar environments, specifically sediments, represents an exciting opportunity to uncover bacterial and chemical diversity and link this to ecosystem and evolutionary parameters. In terms of specialized metabolite production, the bacterial order Actinomycetales, within the phylum Actinobacteria are unsurpassed, producing 10 000 specialized metabolites accounting for over 45 % of all bioactive microbial metabolites. A selective isolation approach focused on spore-forming Actinobacteria of 12 sediment cores from the Antarctic and sub-Arctic generated a culture collection of 50 strains. This consisted of 39 strains belonging to rare A ctinomycetales genera including Microbacterium, Rhodococcus and Pseudonocardia. This study used a combination of nanopore sequencing and molecular networking to explore the community composition, culturable bacterial diversity, evolutionary relatedness and specialized metabolite potential of these strains. Metagenomic analyses using MinION sequencing was able to detect the phylum Actinobacteria across polar sediment cores at an average of 13 % of the total bacterial reads. The resulting molecular network consisted of 1652 parent ions and the lack of known metabolite identification supports the argument that Polar bacteria are likely to produce previously unreported chemistry.